myRT

myRT report for GCA_000271305.1_ASM27130v1

Download annotations/find similar RTs

Seq: AKGD01000001.1 Hydrocarboniphaga effusa AP103 245_1, whole genome shotgun sequence (2597151 bp)
Overview 1 RT 1: 2220214-2227973 bp Neighborhood of RT #1 [2220214, 2228089] RVT-UG5 COG4584 IstB_IS21 Feature: gene Location: 2220214-2220366 bp Feature: gene Location: 2220494-2221306 bp Feature: gene Location: 2222775-2225735 bp Ori: EIT71907.1 Feature: RT Description: RVT-UG5 Note: UG5 RT Location: 2223291-2223732 bp Feature: RT Description: RVT-UG5 Note: UG5 RT Location: 2223291 -2223732 bp Feature: gene Location: 2225788-2227293 bp Ori: EIT71908.1 Feature: domain Description: COG4584 Location: 2225821-2226625 bp Feature: domain Description: COG4584 Location: 2225821 -2226625 bp Feature: gene Location: 2227286-2228089 bp Ori: EIT71909.1 Feature: domain Description: IstB_IS21 Location: 2227445-2227973 bp Feature: domain Description: IstB_IS21 Location: 2227445-2227973 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-UG5, COG4584 (Transposase ), IstB_IS21 (pfam01695)

Seq: AKGD01000002.1 Hydrocarboniphaga effusa AP103 245_2, whole genome shotgun sequence (1181865 bp)
Overview 1 RT 1: 64553-70169 bp Neighborhood of RT #1 [64553, 70183] PRK11840 PRK05659 RVT-GII GIIM HNHc tolA_full SlyB Feature: gene Location: 64553-65368 bp Ori: EIT68873.1 Feature: domain Description: PRK11840 Location: 64583-65354 bp Feature: domain Description: PRK11840 Location: 64583-65354 bp Feature: gene Location: 65394-65594 bp Ori: EIT68874.1 Feature: domain Description: PRK05659 Location: 65397-65592 bp Feature: domain Description: PRK05659 Location: 65397-65592 bp Feature: gene Location: 66328-67707 bp Ori: EIT68875.1 Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 66382-67009 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 66382 -67009 bp Feature: domain Description: GIIM Note: maturase Location: 67069-67294 bp Feature: domain Description: GIIM Note: maturase Location: 67069-672 94 bp Feature: domain Description: HNHc Note: nucleases Location: 67510-67651 bp Feature: domain Description: HNHc Note: nucleases Location: 67510-67651 bp Feature: gene Location: 69223-69450 bp Feature: gene Location: 69494-70183 bp Ori: EIT68877.1 Feature: domain Description: tolA_full Location: 69575-69839 bp Feature: domain Description: tolA_full Location: 69575-69839 bp Feature: domain Description: SlyB Location: 69863-70169 bp Feature: domain Description: SlyB Location: 69863-70169 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT PRK11840 (bifunctional sulfur carrier protein/thiazole synthase protein; Provisional), PRK05659 (sulfur carrier protein ThiS; Validated), RVT-GII, GIIM (pfam08388), HNHc (smart00507), tolA_full (TIGR02794), SlyB (COG3133)