myRT

myRT report for GCA_000272005.1_ASM27200v1

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Seq: AKKU01000003.1 Alishewanella agri BL06 contig003, whole genome shotgun sequence (71869 bp)
Overview 1 RT 1: 35250-41915 bp Neighborhood of RT #1 [35250, 41915] DEXQc_UvrD DEXQc_UvrD SF1_C RVT-Retrons Feature: gene Location: 35250-36398 bp Ori: EIW90161.1 Feature: domain Description: DEXQc_UvrD Location: 35259-35463 bp Feature: domain Description: DEXQc_UvrD Location: 35259-35463 bp Feature: domain Description: DEXQc_UvrD Location: 35658-35853 bp Feature: domain Description: DEXQc_UvrD Location: 35658-35853 bp Feature: domain Description: SF1_C Location: 36189-36339 bp Feature: domain Description: SF1 _C Location: 361 89-36339 bp Feature: gene Location: 36578-37858 bp Feature: gene Location: 38072-39229 bp Ori: EIW90163.1 Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 38333-38960 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 38333-38960 bp Feature: gene Location: 39398-39874 bp Feature: gene Location: 39855-41915 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT DEXQc_UvrD (cd17932), SF1_C (cd18786), RVT-Retrons

Seq: AKKU01000011.1 Alishewanella agri BL06 contig011, whole genome shotgun sequence (467975 bp)
Overview 1 RT 1: 282241-291680 bp Neighborhood of RT #1 [282241, 291688] RMtype1_S_TRD-CR_like RMtype1_S_TRD-CR_like COG0610 RVT-UG16 PRK05367 PRK01202 Feature: gene Location: 282241-283542 bp Ori: EIW89586.1 Feature: domain Description: RMtype1_S_TRD-CR_like Location: 282403-282838 bp Feature: domain Description: RMtype1_S_TRD-CR_like Location: 2 82 403-2 82 838 bp Feature: domain Description: RMtype1_S_TRD-CR_like Location: 283009-283501 bp Feature: domain Description: RMtype1_S_TRD-CR_like Location: 2 83009-2 83501 bp Feature: gene Location: 283555-286593 bp Ori: EIW89587.1 Feature: domain Description: COG0610 Location: 283666-286567 bp Feature: domain Description: COG0610 Location: 2 83666-2 86567 bp Feature: gene Location: 286634-288121 bp Ori: EIW89588.1 Feature: RT Description: RVT-UG16 Note: UG16 RT Location: 286997-287405 bp Feature: RT Description: RVT-UG16 Note: UG16 RT Location: 2 86997-2 87405 bp Feature: gene Location: 288328-291219 bp Ori: EIW89589.1 Feature: domain Description: PRK05367 Location: 288361-291214 bp Feature: domain Description: PRK05367 Location: 2 88361-2 912 14 bp Feature: gene Location: 291299-291688 bp Ori: EIW89590.1 Feature: domain Description: PRK01202 Location: 291302-291680 bp Feature: domain Description: PRK012 02 Location: 2 91302 -2 91680 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RMtype1_S_TRD-CR_like (cl38903), COG0610 (Type I site-specific restriction-modification system, R (restriction) subunit and related helicases ), RVT-UG16, PRK05367 (aminomethyl-transferring glycine dehydrogenase), PRK01202 (glycine cleavage system protein GcvH)