myRT

myRT report for GCA_000272305.2_ASM27230v2

Download annotations/find similar RTs

Seq: AJZL02000212.1 Vibrio splendidus 1S-124 1S-124_contig_381, whole genome shotgun sequence (10152 bp)
Overview 1 RT 1: 2799-10005 bp Neighborhood of RT #1 [2799, 10025] pheT AAA_15 RVT-Retrons MhpC Feature: gene Location: 2799-5222 bp Ori: OEF29993.1 Feature: domain Description: pheT Location: 2802-5220 bp Feature: domain Description: pheT Location: 2802-5220 bp Feature: gene Location: 5432-7687 bp Ori: OEF29994.1 Feature: domain Description: AAA_15 Location: 5435-6428 bp Feature: domain Description: AAA_1 5 Location: 5435-6428 bp Feature: gene Location: 7825-8940 bp Ori: OEF29995.1 Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 7993-8551 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 7993-8551 bp Feature: gene Location: 9153-10025 bp Ori: OEF29996.1 Feature: domain Description: MhpC Location: 9258-10005 bp Feature: domain Description: MhpC Location: 9258-1 0005 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT pheT (PRK09616), AAA_15 (pfam13175), RVT-Retrons, MhpC (COG0596)

Seq: AJZL02000302.1 Vibrio splendidus 1S-124 1S-124_contig_85, whole genome shotgun sequence (60564 bp)
Overview 1 RT 1: 1657-9189 bp Neighborhood of RT #1 [1657, 9200] PRK09019 RVT-UG8 RVT-UG3 GGDEF Feature: gene Location: 1657-1968 bp Ori: OEF23723.1 Feature: domain Description: PRK09019 Location: 1660-1966 bp Feature: domain Description: PRK09019 Location: 1660-1966 bp Feature: gene Location: 2687-2869 bp Feature: gene Location: 3484-5448 bp Ori: OEF23725.1 Feature: RT Description: RVT-UG8 Note: UG8 RT Location: 3991-4441 bp Feature: RT Description: RVT-UG8 Note: UG8 RT Location: 3991-4441 bp Feature: gene Location: 5438-6673 bp Ori: OEF23726.1 Feature: RT Description: RVT-UG3 Note: UG3 RT Location: 5726-6203 bp Feature: RT Description: RVT-UG3 Note: UG3 RT Location: 572 6-62 03 bp Feature: gene Location: 7113-7307 bp Feature: gene Location: 7893-9200 bp Ori: OEF23728.1 Feature: domain Description: GGDEF Location: 8733-9189 bp Feature: domain Description: GGDEF Location: 8733-9189 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT PRK09019 (stress response translation initiation inhibitor YciH), RVT-UG8, RVT-UG3, GGDEF (TIGR00254)