myRT

myRT report for GCA_000272365.2_ASM27236v2

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Seq: AJZO02000193.1 Vibrio tasmaniensis 1F-267 1F-267_contig_41, whole genome shotgun sequence (16812 bp)
Overview 1 RT 1: 9798-16812 bp Neighborhood of RT #1 [9798, 16812] INT_C_like_1 RVT-UG2 Feature: gene Location: 9798-10541 bp Feature: gene Location: 11080-12837 bp Ori: OEF47689.1 Feature: domain Description: INT_C_like_1 Location: 12184-12739 bp Feature: domain Description: INT_C_like_1 Location: 1 21 84-1 2739 bp Feature: gene Location: 13118-14401 bp Ori: OEF47690.1 Feature: RT Description: RVT-UG2 Note: UG2 RT Location: 13319-14102 bp Feature: RT Description: RVT-UG2 Note: UG2 RT Location: 1 331 9-1 41 02 bp Feature: gene Location: 14960-15868 bp Feature: gene Location: 15906-16812 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT INT_C_like_1 (cd01184), RVT-UG2

Seq: AJZO02000079.1 Vibrio tasmaniensis 1F-267 1F-267_contig_19, whole genome shotgun sequence (96014 bp)
Overview 1 RT 1: 2236-8624 bp Neighborhood of RT #1 [2236, 8641] TIR_2 RVT_N RVT-GII GIIM PRK10566 PRK10602 Feature: gene Location: 2236-3672 bp Ori: OEF52622.1 Feature: domain Description: TIR_2 Location: 2257-2668 bp Feature: domain Description: TIR_2 Location: 2 2 57-2 668 bp Feature: gene Location: 3793-4395 bp Feature: gene Location: 4771-6402 bp Ori: OEF52624.1 Feature: domain Description: RVT_N Location: 4978-5221 bp Feature: domain Description: RVT_N Location: 4978-52 2 1 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 5266-5893 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 52 66-5893 bp Feature: domain Description: GIIM Note: maturase Location: 5953-6178 bp Feature: domain Description: GIIM Note: maturase Location: 5953-6178 bp Feature: gene Location: 7117-7884 bp Ori: OEF52625.1 Feature: domain Description: PRK10566 Location: 7147-7786 bp Feature: domain Description: PRK10566 Location: 7147-7786 bp Feature: gene Location: 7997-8641 bp Ori: OEF52626.1 Feature: domain Description: PRK10602 Location: 8000-8624 bp Feature: domain Description: PRK10602 Location: 8000-862 4 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT TIR_2 (pfam13676), RVT_N (pfam13655), RVT-GII, GIIM (pfam08388), PRK10566 (esterase; Provisional), PRK10602 (murein tripeptide amidase MpaA)