myRT

myRT report for GCA_000273035.1_Bact_dore_CL02T00C15_V1

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Seq: JH724116.1 Bacteroides dorei CL02T00C15 genomic scaffold supercont1.7, whole genome shotgun sequence (305358 bp)
Overview 1 RT 1: 56628-67999 bp 2 RT 2: 85341-94648 bp 3 RT 3: 98682-104071 bp Neighborhood of RT #1 [56628, 68067] DUF1896 N6_Mtase COG4646 RVT_N RVT-GII GIIM PRK13351 Neighborhood of RT #2 [85341, 94683] DUF4134 RVT_N RVT-GII GIIM DUF4134 DUF4133 Bac_Flav_CT_G RVT_N RVT-GII GIIM Bac_Flav_CT_G DUF3876 Neighborhood of RT #3 [98682, 104136] Bac_Flav_CT_N RVT-GII Intron_maturas2 Toprim_2 DUF3872 Feature: gene Location: 56628-57215 bp Feature: domain Description: DUF1896 Location: 56793-57213 bp Feature: domain Description: DUF1 896 Location: 56793-5721 3 bp Feature: gene Location: 57205-61893 bp Feature: domain Description: N6_Mtase Location: 57517-58120 bp Feature: domain Description: N6_Mtase Location: 5751 7-581 20 bp Feature: domain Description: COG4646 Location: 59449-61510 bp Feature: domain Description: COG4646 Location: 59449-61 51 0 bp Feature: gene Location: 62550-64217 bp Feature: RT Description: RVT_N Location: 62604-62847 bp Feature: RT Description: RVT_N Location: 62604-62847 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 62892-63540 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 62892-63540 bp Feature: domain Description: GIIM Note: maturase Location: 63594-63825 bp Feature: domain Description: GIIM Note: maturase Location: 63594-63825 bp Feature: gene Location: 64201-65484 bp Feature: gene Location: 66142-68067 bp Feature: domain Description: PRK13351 Location: 66145-67999 bp Feature: domain Description: PRK1 3351 Location: 661 45-67999 bp Feature: gene Location: 85341-86069 bp Feature: gene Location: 86271-86507 bp Feature: domain Description: DUF4134 Location: 86316-86493 bp Feature: domain Description: DUF41 34 Location: 8631 6-86493 bp Feature: gene Location: 87123-88778 bp Feature: RT Description: RVT_N Location: 87180-87417 bp Feature: RT Description: RVT_N Location: 871 80-8741 7 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 87468-88116 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 87468-881 1 6 bp Feature: domain Description: GIIM Note: maturase Location: 88173-88404 bp Feature: domain Description: GIIM Note: maturase Location: 881 73-88404 bp Feature: gene Location: 88775-89017 bp Feature: domain Description: DUF4134 Location: 88922-89012 bp Feature: domain Description: DUF41 34 Location: 88922-8901 2 bp Feature: gene Location: 89028-89360 bp Feature: domain Description: DUF4133 Location: 89046-89316 bp Feature: domain Description: DUF41 33 Location: 89046-8931 6 bp Feature: gene Location: 89357-91390 bp Feature: domain Description: Bac_Flav_CT_G Location: 89360-91385 bp Feature: domain Description: Bac_Flav_CT_G Location: 89360-91 385 bp Feature: gene Location: 92014-93669 bp Feature: RT Description: RVT_N Location: 92068-92311 bp Feature: RT Description: RVT_N Location: 92068-9231 1 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 92356-93004 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 92356-93004 bp Feature: domain Description: GIIM Note: maturase Location: 93055-93289 bp Feature: domain Description: GIIM Note: maturase Location: 93055-93289 bp Feature: gene Location: 93672-94262 bp Feature: domain Description: Bac_Flav_CT_G Location: 93789-94245 bp Feature: domain Description: Bac_Flav_CT_G Location: 93789-94245 bp Feature: gene Location: 94303-94683 bp Feature: domain Description: DUF3876 Location: 94384-94648 bp Feature: domain Description: DUF3876 Location: 94384-94648 bp Feature: gene Location: 98682-99668 bp Feature: domain Description: Bac_Flav_CT_N Location: 98685-99645 bp Feature: domain Description: Bac_Flav_CT_N Location: 98685-99645 bp Feature: gene Location: 99656-100441 bp Feature: gene Location: 100990-102798 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 101254-102076 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1 01 254-1 02076 bp Feature: domain Description: Intron_maturas2 Location: 102172-102457 bp Feature: domain Description: Intron_maturas2 Location: 1 021 72-1 02457 bp Feature: gene Location: 102812-103636 bp Feature: domain Description: Toprim_2 Location: 103328-103583 bp Feature: domain Description: Toprim_2 Location: 1 03328-1 03583 bp Feature: gene Location: 103633-104136 bp Feature: domain Description: DUF3872 Location: 103684-104071 bp Feature: domain Description: DUF3872 Location: 1 03684-1 04071 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT DUF1896 (pfam08989), N6_Mtase (pfam02384), COG4646 (Adenine-specific DNA methylase, N12 class ), RVT_N (pfam13655), RVT-GII, GIIM (pfam08388), PRK13351 (elongation factor G-like protein), DUF4134 (pfam13572), DUF4133 (pfam13571), Bac_Flav_CT_G (TIGR03783)
DUF3876 (pfam12992), Intron_maturas2 (pfam01348), Toprim_2 (pfam13155), DUF3872 (pfam12988), Bac_Flav_CT_N (TIGR03780)

Seq: JH724112.1 Bacteroides dorei CL02T00C15 genomic scaffold supercont1.3, whole genome shotgun sequence (1151712 bp)
Overview 1 RT 1: 884537-892115 bp Neighborhood of RT #1 [884537, 892297] RVT-CRISPR-like OMP_RagA_SusC SusD Feature: gene Location: 884537-884731 bp Feature: gene Location: 885064-885165 bp Feature: gene Location: 885568-886842 bp Feature: RT Description: RVT-CRISPR-like Note: CRISPR-like RT Location: 885775-886417 bp Feature: RT Description: RVT-CRISPR-like Note: CRISPR-like RT Location: 885775-886417 bp Feature: gene Location: 887365-890541 bp Feature: domain Description: OMP_RagA_SusC Location: 887440-890533 bp Feature: domain Description: OMP_RagA_SusC Location: 887440-890533 bp Feature: gene Location: 890570-892297 bp Feature: domain Description: SusD Location: 890795-892115 bp Feature: domain Description: SusD Location: 890795-892 115 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-CRISPR, OMP_RagA_SusC (TIGR04056), SusD (NF033071)

Seq: JH724111.1 Bacteroides dorei CL02T00C15 genomic scaffold supercont1.2, whole genome shotgun sequence (1399941 bp)
Overview 1 RT 1: 817239-821661 bp 2 RT 2: 944416-953878 bp 3 RT 3: 1013606-1017149 bp Neighborhood of RT #1 [817239, 821661] RVT-DGRs Neighborhood of RT #2 [944416, 955083] DUF4065 N6_Mtase COG4646 RVT_N RVT-GII GIIM KAP_NTPase KAP_NTPase Neighborhood of RT #3 [1013606, 1017163] DUF4133 DUF4134 RVT-GII Intron_maturas2 HNHc DUF4134 DUF4134 Feature: gene Location: 817239-818261 bp Feature: gene Location: 818282-819601 bp Feature: gene Location: 820118-820933 bp Feature: RT Description: RVT-DGRs Note: DGRs RT Location: 820436-820772 bp Feature: RT Description: RVT-DGRs Note: DGRs RT Location: 82043 6-820772 bp Feature: gene Location: 820953-821129 bp Feature: gene Location: 821314-821661 bp Feature: gene Location: 944416-945006 bp Feature: domain Description: DUF4065 Location: 944539-944866 bp Feature: domain Description: DUF4065 Location: 94453 9-944866 bp Feature: gene Location: 945513-949550 bp Feature: domain Description: N6_Mtase Location: 946005-946419 bp Feature: domain Description: N6_Mtase Location: 946005-946419 bp Feature: domain Description: COG4646 Location: 947205-948945 bp Feature: domain Description: COG4646 Location: 947205-948945 bp Feature: gene Location: 950207-951874 bp Feature: RT Description: RVT_N Location: 950261-950504 bp Feature: RT Description: RVT_N Location: 950261-950504 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 950549-951197 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 950549-951197 bp Feature: domain Description: GIIM Note: maturase Location: 951251-951482 bp Feature: domain Description: GIIM Note: maturase Location: 951251-951482 bp Feature: gene Location: 951858-952955 bp Feature: gene Location: 953194-955083 bp Feature: domain Description: KAP_NTPase Location: 953242-953335 bp Feature: domain Description: KAP_NTPase Location: 953 242-953 3 3 5 bp Feature: domain Description: KAP_NTPase Location: 953605-953878 bp Feature: domain Description: KAP_NTPase Location: 953 605-953 878 bp Feature: gene Location: 1013606-1013899 bp Feature: domain Description: DUF4133 Location: 1013645-1013825 bp Feature: domain Description: DUF413 3 Location: 1013 645-1013 825 bp Feature: gene Location: 1013913-1014107 bp Feature: domain Description: DUF4134 Location: 1014003-1014093 bp Feature: domain Description: DUF413 4 Location: 1014003 -1014093 bp Feature: gene Location: 1014132-1015943 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1014396-1015218 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 10143 96-1015218 bp Feature: domain Description: Intron_maturas2 Location: 1015407-1015617 bp Feature: domain Description: Intron_maturas2 Location: 1015407-1015617 bp Feature: domain Description: HNHc Note: nucleases Location: 1015767-1015872 bp Feature: domain Description: HNHc Note: nucleases Location: 1015767-1015872 bp Feature: gene Location: 1016485-1016775 bp Feature: domain Description: DUF4134 Location: 1016560-1016758 bp Feature: domain Description: DUF413 4 Location: 1016560-1016758 bp Feature: gene Location: 1016840-1017163 bp Feature: domain Description: DUF4134 Location: 1016864-1017149 bp Feature: domain Description: DUF413 4 Location: 1016864-1017149 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-DGRs, DUF4065 (pfam13274), N6_Mtase (pfam02384), COG4646 (Adenine-specific DNA methylase, N12 class ), RVT_N (pfam13655), RVT-GII, GIIM (pfam08388), KAP_NTPase (pfam07693), DUF4133 (pfam13571), DUF4134 (pfam13572)
Intron_maturas2 (pfam01348), HNHc (smart00507)

Seq: JH724113.1 Bacteroides dorei CL02T00C15 genomic scaffold supercont1.4, whole genome shotgun sequence (789059 bp)
Overview 1 RT 1: 595651-599083 bp 2 RT 2: 686841-694718 bp Neighborhood of RT #1 [595651, 599160] DUF4134 RVT-GII Intron_maturas2 HNHc DUF4134 DUF4133 Neighborhood of RT #2 [686841, 694718] Mfa_like_1 Mfa2 RVT_N RVT-GII GIIM DUF4906 Feature: gene Location: 595651-595977 bp Feature: gene Location: 596025-596279 bp Feature: domain Description: DUF4134 Location: 596061-596262 bp Feature: domain Description: DUF4 134 Location: 596061-596262 bp Feature: gene Location: 596821-598632 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 597085-597907 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 597085-597907 bp Feature: domain Description: Intron_maturas2 Location: 598096-598306 bp Feature: domain Description: Intron_maturas2 Location: 598096-598306 bp Feature: domain Description: HNHc Note: nucleases Location: 598456-598561 bp Feature: domain Description: HNHc Note: nucleases Location: 5984 56-598561 bp Feature: gene Location: 598657-598851 bp Feature: domain Description: DUF4134 Location: 598747-598837 bp Feature: domain Description: DUF4 134 Location: 59874 7-598837 bp Feature: gene Location: 598864-599160 bp Feature: domain Description: DUF4133 Location: 598906-599083 bp Feature: domain Description: DUF4 133 Location: 598906-599083 bp Feature: gene Location: 686841-687833 bp Feature: domain Description: Mfa_like_1 Location: 687000-687801 bp Feature: domain Description: Mfa_like_1 Location: 687000-687801 bp Feature: gene Location: 687869-688909 bp Feature: domain Description: Mfa2 Location: 688013-688694 bp Feature: domain Description: Mfa2 Location: 688013-688694 bp Feature: gene Location: 688842-690497 bp Feature: RT Description: RVT_N Location: 688899-689136 bp Feature: RT Description: RVT_N Location: 688899-689136 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 689187-689835 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 689187-689835 bp Feature: domain Description: GIIM Note: maturase Location: 689892-690123 bp Feature: domain Description: GIIM Note: maturase Location: 689892-690123 bp Feature: gene Location: 691399-694401 bp Feature: domain Description: DUF4906 Location: 691783-692545 bp Feature: domain Description: DUF4 906 Location: 691783-69254 5 bp Feature: gene Location: 694488-694718 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT DUF4134 (pfam13572), RVT-GII, Intron_maturas2 (pfam01348), HNHc (smart00507), DUF4133 (pfam13571), Mfa_like_1 (pfam13149), Mfa2 (pfam08842), RVT_N (pfam13655), GIIM (pfam08388), DUF4906 (pfam16249)

Seq: JH724110.1 Bacteroides dorei CL02T00C15 genomic scaffold supercont1.1, whole genome shotgun sequence (1402770 bp)
Overview 1 RT 1: 710673-716987 bp 2 RT 2: 1007377-1011732 bp 3 RT 3: 1061921-1071071 bp Neighborhood of RT #1 [710673, 716992] ADOP ADOP RVT-GII Intron_maturas2 HNHc ADOP Neighborhood of RT #2 [1007377, 1011732] Bac_Flav_CT_G RVT_N RVT-GII GIIM Bac_Flav_CT_G Neighborhood of RT #3 [1061921, 1071097] DUF4134 RVT_N RVT-GII GIIM DUF4134 DUF4133 Bac_Flav_CT_G RVT_N RVT-GII GIIM Bac_Flav_CT_G DUF3876 Feature: gene Location: 710673-711929 bp Feature: domain Description: ADOP Location: 710697-711924 bp Feature: domain Description: ADOP Location: 710697-711924 bp Feature: gene Location: 711952-712743 bp Feature: domain Description: ADOP Location: 712000-712741 bp Feature: domain Description: ADOP Location: 712000-712741 bp Feature: gene Location: 713369-715180 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 713633-714455 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 713633-71445 5 bp Feature: domain Description: Intron_maturas2 Location: 714644-714854 bp Feature: domain Description: Intron_maturas2 Location: 714644-71485 4 bp Feature: domain Description: HNHc Note: nucleases Location: 715004-715109 bp Feature: domain Description: HNHc Note: nucleases Location: 715 004-715 109 bp Feature: gene Location: 715151-715708 bp Feature: gene Location: 715712-716992 bp Feature: domain Description: ADOP Location: 715739-716987 bp Feature: domain Description: ADOP Location: 715 739-716987 bp Feature: gene Location: 1007377-1007508 bp Feature: gene Location: 1007515-1008123 bp Feature: domain Description: Bac_Flav_CT_G Location: 1007632-1008091 bp Feature: domain Description: Bac_Flav_CT_G Location: 1007632-1008091 bp Feature: gene Location: 1008126-1009781 bp Feature: RT Description: RVT_N Location: 1008180-1008423 bp Feature: RT Description: RVT_N Location: 1008180-1008423 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1008468-1009116 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1008468-1009116 bp Feature: domain Description: GIIM Note: maturase Location: 1009167-1009401 bp Feature: domain Description: GIIM Note: maturase Location: 1009167-1009401 bp Feature: gene Location: 1010405-1011199 bp Feature: domain Description: Bac_Flav_CT_G Location: 1010408-1011194 bp Feature: domain Description: Bac_Flav_CT_G Location: 1010408-1011194 bp Feature: gene Location: 1011358-1011732 bp Feature: gene Location: 1061921-1062583 bp Feature: gene Location: 1062754-1062969 bp Feature: domain Description: DUF4134 Location: 1062772-1062955 bp Feature: domain Description: DUF4134 Location: 1062772-106295 5 bp Feature: gene Location: 1063585-1065240 bp Feature: RT Description: RVT_N Location: 1063642-1063879 bp Feature: RT Description: RVT_N Location: 1063642-1063879 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1063930-1064578 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1063930-10645 78 bp Feature: domain Description: GIIM Note: maturase Location: 1064635-1064866 bp Feature: domain Description: GIIM Note: maturase Location: 1064635 -1064866 bp Feature: gene Location: 1065237-1065479 bp Feature: domain Description: DUF4134 Location: 1065384-1065474 bp Feature: domain Description: DUF4134 Location: 1065 384-1065 474 bp Feature: gene Location: 1065490-1065825 bp Feature: domain Description: DUF4133 Location: 1065508-1065775 bp Feature: domain Description: DUF4133 Location: 1065 5 08-1065 775 bp Feature: gene Location: 1065822-1067852 bp Feature: domain Description: Bac_Flav_CT_G Location: 1065825-1067847 bp Feature: domain Description: Bac_Flav_CT_G Location: 1065 825 -1067847 bp Feature: gene Location: 1068476-1070131 bp Feature: RT Description: RVT_N Location: 1068530-1068773 bp Feature: RT Description: RVT_N Location: 10685 30-1068773 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1068818-1069466 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1068818-1069466 bp Feature: domain Description: GIIM Note: maturase Location: 1069517-1069751 bp Feature: domain Description: GIIM Note: maturase Location: 10695 17-106975 1 bp Feature: gene Location: 1070134-1070745 bp Feature: domain Description: Bac_Flav_CT_G Location: 1070251-1070710 bp Feature: domain Description: Bac_Flav_CT_G Location: 107025 1-1070710 bp Feature: gene Location: 1070747-1071097 bp Feature: domain Description: DUF3876 Location: 1070804-1071071 bp Feature: domain Description: DUF3876 Location: 1070804-1071071 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT ADOP (TIGR03434), RVT-GII, Intron_maturas2 (pfam01348), HNHc (smart00507), Bac_Flav_CT_G (TIGR03783), RVT_N (pfam13655), GIIM (pfam08388), DUF4134 (pfam13572), DUF4133 (pfam13571), DUF3876 (pfam12992)

Seq: JH724114.1 Bacteroides dorei CL02T00C15 genomic scaffold supercont1.5, whole genome shotgun sequence (431307 bp)
Overview 1 RT 1: 9000-14216 bp Neighborhood of RT #1 [9000, 14216] Phage_head_fibr RVT_N RVT-GII GIIM Phage_head_fibr Feature: gene Location: 9000-10082 bp Feature: gene Location: 10101-10880 bp Feature: domain Description: Phage_head_fibr Location: 10245-10875 bp Feature: domain Description: Phage_head_fibr Location: 10245-10875 bp Feature: gene Location: 10877-12532 bp Feature: RT Description: RVT_N Location: 10934-11171 bp Feature: RT Description: RVT_N Location: 10934-11171 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 11222-11870 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 11222-11870 bp Feature: domain Description: GIIM Note: maturase Location: 11927-12158 bp Feature: domain Description: GIIM Note: maturase Location: 11927-12158 bp Feature: gene Location: 13343-13576 bp Feature: domain Description: Phage_head_fibr Location: 13358-13550 bp Feature: domain Description: Phage_head_fibr Location: 13358-13550 bp Feature: gene Location: 13581-14216 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT Phage_head_fibr (pfam11133), RVT_N (pfam13655), RVT-GII, GIIM (pfam08388)

Seq: JH724115.1 Bacteroides dorei CL02T00C15 genomic scaffold supercont1.6, whole genome shotgun sequence (331513 bp)
Overview 1 RT 1: 65806-82256 bp 2 RT 2: 191830-195318 bp 3 RT 3: 206486-211519 bp 4 RT 4: 227834-233202 bp 5 RT 5: 279268-284609 bp Neighborhood of RT #1 [65806, 82256] AAA_25 RVT-GII Intron_maturas2 Toprim_2 DUF4134 DUF4134 RVT-GII Intron_maturas2 HNHc DUF4134 DUF4133 Bac_Flav_CT_G Bac_Flav_CT_G RVT_N RVT-GII GIIM Bac_Flav_CT_G Neighborhood of RT #2 [191830, 195386] DUF4134 DUF4134 RVT-GII Intron_maturas2 HNHc DUF4134 DUF4133 Neighborhood of RT #3 [206486, 211519] HTH_XRE Bac_Flav_CT_G Bac_Flav_CT_G RVT_N RVT-GII GIIM Bac_Flav_CT_G Neighborhood of RT #4 [227834, 233330] PriCT_2 DUF3987 RVT_N RVT-GII GIIM DUF4248 HU-HIG Neighborhood of RT #5 [279268, 288730] ArgoMid ArgoMid RVT-DGRs Laminin_G_3 Laminin_G_3 Feature: gene Location: 65806-66861 bp Feature: domain Description: AAA_25 Location: 65947-66409 bp Feature: domain Description: AAA_25 Location: 65947 -66409 bp Feature: gene Location: 66908-67090 bp Feature: gene Location: 67635-69443 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 67899-68721 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 67 899-687 21 bp Feature: domain Description: Intron_maturas2 Location: 68817-69102 bp Feature: domain Description: Intron_maturas2 Location: 68817 -69102 bp Feature: gene Location: 69457-70275 bp Feature: domain Description: Toprim_2 Location: 69976-70258 bp Feature: domain Description: Toprim_2 Location: 6997 6-7 0258 bp Feature: gene Location: 70531-70980 bp Feature: gene Location: 71019-71309 bp Feature: domain Description: DUF4134 Location: 71025-71295 bp Feature: domain Description: DUF4134 Location: 7 1025-7 1295 bp Feature: gene Location: 71361-71639 bp Feature: domain Description: DUF4134 Location: 71421-71622 bp Feature: domain Description: DUF4134 Location: 7 1421-7 1622 bp Feature: gene Location: 72181-73992 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 72445-73267 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 7 2445-7 3267 bp Feature: domain Description: Intron_maturas2 Location: 73456-73666 bp Feature: domain Description: Intron_maturas2 Location: 7 3456-7 3666 bp Feature: domain Description: HNHc Note: nucleases Location: 73816-73921 bp Feature: domain Description: HNHc Note: nucleases Location: 7 3816-7 3921 bp Feature: gene Location: 74017-74208 bp Feature: domain Description: DUF4134 Location: 74107-74197 bp Feature: domain Description: DUF4134 Location: 7 4107 -7 4197 bp Feature: gene Location: 74221-74517 bp Feature: domain Description: DUF4133 Location: 74263-74440 bp Feature: domain Description: DUF4133 Location: 7 4263-7 4440 bp Feature: gene Location: 74616-76775 bp Feature: domain Description: Bac_Flav_CT_G Location: 74757-76272 bp Feature: domain Description: Bac_Flav_CT_G Location: 7 47 57 -7 627 2 bp Feature: domain Description: Bac_Flav_CT_G Location: 76350-76770 bp Feature: domain Description: Bac_Flav_CT_G Location: 7 6350-7 67 7 0 bp Feature: gene Location: 77399-79054 bp Feature: RT Description: RVT_N Location: 77453-77696 bp Feature: RT Description: RVT_N Location: 7 7 453-7 7 696 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 77741-78389 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 7 7 7 41-7 8389 bp Feature: domain Description: GIIM Note: maturase Location: 78440-78674 bp Feature: domain Description: GIIM Note: maturase Location: 7 8440-7 867 4 bp Feature: gene Location: 79057-79734 bp Feature: domain Description: Bac_Flav_CT_G Location: 79174-79621 bp Feature: domain Description: Bac_Flav_CT_G Location: 7 917 4-7 9621 bp Feature: gene Location: 79731-82256 bp Feature: gene Location: 191830-192156 bp Feature: domain Description: DUF4134 Location: 191851-192142 bp Feature: domain Description: DUF4134 Location: 191851-192142 bp Feature: gene Location: 192236-192505 bp Feature: domain Description: DUF4134 Location: 192287-192488 bp Feature: domain Description: DUF4134 Location: 192287 -192488 bp Feature: gene Location: 193047-194858 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 193311-194133 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 193311-194133 bp Feature: domain Description: Intron_maturas2 Location: 194322-194532 bp Feature: domain Description: Intron_maturas2 Location: 194322-194532 bp Feature: domain Description: HNHc Note: nucleases Location: 194682-194787 bp Feature: domain Description: HNHc Note: nucleases Location: 194682-1947 87 bp Feature: gene Location: 194883-195077 bp Feature: domain Description: DUF4134 Location: 194973-195063 bp Feature: domain Description: DUF4134 Location: 19497 3-195063 bp Feature: gene Location: 195090-195386 bp Feature: domain Description: DUF4133 Location: 195132-195318 bp Feature: domain Description: DUF4133 Location: 195132-195318 bp Feature: gene Location: 206486-206686 bp Feature: domain Description: HTH_XRE Location: 206489-206657 bp Feature: domain Description: HTH_XRE Location: 206489-206657 bp Feature: gene Location: 207093-207887 bp Feature: domain Description: Bac_Flav_CT_G Location: 207096-207381 bp Feature: domain Description: Bac_Flav_CT_G Location: 207 096-207 381 bp Feature: domain Description: Bac_Flav_CT_G Location: 207438-207882 bp Feature: domain Description: Bac_Flav_CT_G Location: 207 438-207 882 bp Feature: gene Location: 208511-210166 bp Feature: RT Description: RVT_N Location: 208565-208808 bp Feature: RT Description: RVT_N Location: 208565-208808 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 208853-209501 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 208853-209501 bp Feature: domain Description: GIIM Note: maturase Location: 209552-209786 bp Feature: domain Description: GIIM Note: maturase Location: 209552-2097 86 bp Feature: gene Location: 210169-210831 bp Feature: domain Description: Bac_Flav_CT_G Location: 210286-210730 bp Feature: domain Description: Bac_Flav_CT_G Location: 210286-2107 30 bp Feature: gene Location: 210839-211519 bp Feature: gene Location: 227834-229639 bp Feature: domain Description: PriCT_2 Location: 227876-228101 bp Feature: domain Description: PriCT_2 Location: 227 87 6-228101 bp Feature: domain Description: DUF3987 Location: 228359-229430 bp Feature: domain Description: DUF3987 Location: 228359-229430 bp Feature: gene Location: 229766-229924 bp Feature: gene Location: 229921-231576 bp Feature: RT Description: RVT_N Location: 229978-230215 bp Feature: RT Description: RVT_N Location: 22997 8-230215 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 230266-230914 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 230266-230914 bp Feature: domain Description: GIIM Note: maturase Location: 230971-231202 bp Feature: domain Description: GIIM Note: maturase Location: 23097 1-231202 bp Feature: gene Location: 232271-232465 bp Feature: domain Description: DUF4248 Location: 232274-232463 bp Feature: domain Description: DUF4248 Location: 23227 4-232463 bp Feature: gene Location: 232836-233330 bp Feature: domain Description: HU-HIG Location: 232842-233202 bp Feature: domain Description: HU-HIG Location: 232842-233202 bp Feature: gene Location: 279268-279510 bp Feature: domain Description: ArgoMid Location: 279283-279391 bp Feature: domain Description: ArgoMid Location: 27 9283-27 9391 bp Feature: domain Description: ArgoMid Location: 279406-279505 bp Feature: domain Description: ArgoMid Location: 27 9406-27 9505 bp Feature: gene Location: 279690-280175 bp Feature: gene Location: 280172-281476 bp Feature: RT Description: RVT-DGRs Note: DGRs RT Location: 280382-281060 bp Feature: RT Description: RVT-DGRs Note: DGRs RT Location: 280382-281060 bp Feature: gene Location: 281802-281996 bp Feature: gene Location: 281993-288730 bp Feature: domain Description: Laminin_G_3 Location: 283454-283532 bp Feature: domain Description: Laminin_G_3 Location: 283454-283532 bp Feature: domain Description: Laminin_G_3 Location: 284183-284609 bp Feature: domain Description: Laminin_G_3 Location: 284183-284609 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT AAA_25 (pfam13481), RVT-GII, Intron_maturas2 (pfam01348), Toprim_2 (pfam13155), DUF4134 (pfam13572), HNHc (smart00507), DUF4133 (pfam13571), Bac_Flav_CT_G (TIGR03783), RVT_N (pfam13655), GIIM (pfam08388)
HTH_XRE (smart00530), PriCT_2 (pfam08707), DUF3987 (pfam13148), DUF4248 (pfam14053), HU-HIG (pfam18291), ArgoMid (pfam16487), RVT-DGRs, Laminin_G_3 (pfam13385)