myRT

myRT report for GCA_000273055.1_Bact_dore_CL02T12C06_V1

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Seq: JH724134.1 Bacteroides dorei CL02T12C06 genomic scaffold supercont1.3, whole genome shotgun sequence (1094103 bp)
Overview 1 RT 1: 822991-827413 bp 2 RT 2: 950502-959964 bp 3 RT 3: 1017016-1020559 bp Neighborhood of RT #1 [822991, 827413] RVT-DGRs Neighborhood of RT #2 [950502, 961169] DUF4065 N6_Mtase COG4646 RVT_N RVT-GII GIIM KAP_NTPase KAP_NTPase Neighborhood of RT #3 [1017016, 1020573] DUF4133 DUF4134 RVT-GII Intron_maturas2 HNHc DUF4134 DUF4134 Feature: gene Location: 822991-824013 bp Feature: gene Location: 824034-825353 bp Feature: gene Location: 825870-826685 bp Feature: RT Description: RVT-DGRs Note: DGRs RT Location: 826188-826524 bp Feature: RT Description: RVT-DGRs Note: DGRs RT Location: 8261 88-826524 bp Feature: gene Location: 826705-826881 bp Feature: gene Location: 827066-827413 bp Feature: gene Location: 950502-951092 bp Feature: domain Description: DUF4065 Location: 950625-950952 bp Feature: domain Description: DUF4065 Location: 950625-950952 bp Feature: gene Location: 951599-955636 bp Feature: domain Description: N6_Mtase Location: 952091-952505 bp Feature: domain Description: N6_Mtase Location: 952091 -952505 bp Feature: domain Description: COG4646 Location: 953291-955031 bp Feature: domain Description: COG4646 Location: 953291 -955031 bp Feature: gene Location: 956293-957960 bp Feature: RT Description: RVT_N Location: 956347-956590 bp Feature: RT Description: RVT_N Location: 956347-956590 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 956635-957283 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 956635-957283 bp Feature: domain Description: GIIM Note: maturase Location: 957337-957568 bp Feature: domain Description: GIIM Note: maturase Location: 957337-957568 bp Feature: gene Location: 957944-959041 bp Feature: gene Location: 959280-961169 bp Feature: domain Description: KAP_NTPase Location: 959328-959421 bp Feature: domain Description: KAP_NTPase Location: 959328-959421 bp Feature: domain Description: KAP_NTPase Location: 959691-959964 bp Feature: domain Description: KAP_NTPase Location: 959691 -959964 bp Feature: gene Location: 1017016-1017309 bp Feature: domain Description: DUF4133 Location: 1017055-1017235 bp Feature: domain Description: DUF41 33 Location: 1 01 7055-1 01 7235 bp Feature: gene Location: 1017323-1017517 bp Feature: domain Description: DUF4134 Location: 1017413-1017503 bp Feature: domain Description: DUF41 34 Location: 1 01 741 3-1 01 7503 bp Feature: gene Location: 1017542-1019353 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1017806-1018628 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1 01 7806-1 01 8628 bp Feature: domain Description: Intron_maturas2 Location: 1018817-1019027 bp Feature: domain Description: Intron_maturas2 Location: 1 01 881 7-1 01 9027 bp Feature: domain Description: HNHc Note: nucleases Location: 1019177-1019282 bp Feature: domain Description: HNHc Note: nucleases Location: 1 01 91 77-1 01 9282 bp Feature: gene Location: 1019895-1020185 bp Feature: domain Description: DUF4134 Location: 1019970-1020168 bp Feature: domain Description: DUF41 34 Location: 1 01 9970-1 0201 68 bp Feature: gene Location: 1020250-1020573 bp Feature: domain Description: DUF4134 Location: 1020274-1020559 bp Feature: domain Description: DUF41 34 Location: 1 020274-1 020559 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-DGRs, DUF4065 (pfam13274), N6_Mtase (pfam02384), COG4646 (Adenine-specific DNA methylase, N12 class ), RVT_N (pfam13655), RVT-GII, GIIM (pfam08388), KAP_NTPase (pfam07693), DUF4133 (pfam13571), DUF4134 (pfam13572)
Intron_maturas2 (pfam01348), HNHc (smart00507)

Seq: JH724139.1 Bacteroides dorei CL02T12C06 genomic scaffold supercont1.8, whole genome shotgun sequence (300176 bp)
Overview 1 RT 1: 56626-67997 bp 2 RT 2: 85926-95233 bp 3 RT 3: 99267-104656 bp Neighborhood of RT #1 [56626, 68065] DUF1896 N6_Mtase COG4646 RVT_N RVT-GII GIIM PRK13351 Neighborhood of RT #2 [85926, 95268] DUF4134 RVT_N RVT-GII GIIM DUF4134 DUF4133 Bac_Flav_CT_G RVT_N RVT-GII GIIM Bac_Flav_CT_G DUF3876 Neighborhood of RT #3 [99267, 104721] Bac_Flav_CT_N RVT-GII Intron_maturas2 Toprim_2 DUF3872 Feature: gene Location: 56626-57213 bp Feature: domain Description: DUF1896 Location: 56791-57211 bp Feature: domain Description: DUF1896 Location: 56791-572 11 bp Feature: gene Location: 57203-61891 bp Feature: domain Description: N6_Mtase Location: 57515-58118 bp Feature: domain Description: N6_Mtase Location: 57515-58118 bp Feature: domain Description: COG4646 Location: 59447-61508 bp Feature: domain Description: COG4646 Location: 59447-61508 bp Feature: gene Location: 62548-64215 bp Feature: RT Description: RVT_N Location: 62602-62845 bp Feature: RT Description: RVT_N Location: 62 602 -62 845 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 62890-63538 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 62 890-63538 bp Feature: domain Description: GIIM Note: maturase Location: 63592-63823 bp Feature: domain Description: GIIM Note: maturase Location: 63592 -6382 3 bp Feature: gene Location: 64199-65482 bp Feature: gene Location: 66140-68065 bp Feature: domain Description: PRK13351 Location: 66143-67997 bp Feature: domain Description: PRK13351 Location: 66143-67997 bp Feature: gene Location: 85926-86654 bp Feature: gene Location: 86856-87092 bp Feature: domain Description: DUF4134 Location: 86901-87078 bp Feature: domain Description: DUF4134 Location: 86901-87078 bp Feature: gene Location: 87708-89363 bp Feature: RT Description: RVT_N Location: 87765-88002 bp Feature: RT Description: RVT_N Location: 87765-88002 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 88053-88701 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 88053-88701 bp Feature: domain Description: GIIM Note: maturase Location: 88758-88989 bp Feature: domain Description: GIIM Note: maturase Location: 88758-88989 bp Feature: gene Location: 89360-89602 bp Feature: domain Description: DUF4134 Location: 89507-89597 bp Feature: domain Description: DUF4134 Location: 89507-89597 bp Feature: gene Location: 89613-89945 bp Feature: domain Description: DUF4133 Location: 89631-89901 bp Feature: domain Description: DUF4133 Location: 89631-89901 bp Feature: gene Location: 89942-91975 bp Feature: domain Description: Bac_Flav_CT_G Location: 89945-91970 bp Feature: domain Description: Bac_Flav_CT_G Location: 89945-91970 bp Feature: gene Location: 92599-94254 bp Feature: RT Description: RVT_N Location: 92653-92896 bp Feature: RT Description: RVT_N Location: 92 653-92 896 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 92941-93589 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 92 941-93589 bp Feature: domain Description: GIIM Note: maturase Location: 93640-93874 bp Feature: domain Description: GIIM Note: maturase Location: 93640-93874 bp Feature: gene Location: 94257-94847 bp Feature: domain Description: Bac_Flav_CT_G Location: 94374-94830 bp Feature: domain Description: Bac_Flav_CT_G Location: 94374-94830 bp Feature: gene Location: 94888-95268 bp Feature: domain Description: DUF3876 Location: 94969-95233 bp Feature: domain Description: DUF3876 Location: 94969-952 33 bp Feature: gene Location: 99267-100253 bp Feature: domain Description: Bac_Flav_CT_N Location: 99270-100230 bp Feature: domain Description: Bac_Flav_CT_N Location: 992 70-1002 30 bp Feature: gene Location: 100241-101026 bp Feature: gene Location: 101575-103383 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 101839-102661 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 101839-102 661 bp Feature: domain Description: Intron_maturas2 Location: 102757-103042 bp Feature: domain Description: Intron_maturas2 Location: 102 757-103042 bp Feature: gene Location: 103397-104221 bp Feature: domain Description: Toprim_2 Location: 103913-104168 bp Feature: domain Description: Toprim_2 Location: 103913-104168 bp Feature: gene Location: 104218-104721 bp Feature: domain Description: DUF3872 Location: 104269-104656 bp Feature: domain Description: DUF3872 Location: 1042 69-104656 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT DUF1896 (pfam08989), N6_Mtase (pfam02384), COG4646 (Adenine-specific DNA methylase, N12 class ), RVT_N (pfam13655), RVT-GII, GIIM (pfam08388), PRK13351 (elongation factor G-like protein), DUF4134 (pfam13572), DUF4133 (pfam13571), Bac_Flav_CT_G (TIGR03783)
DUF3876 (pfam12992), Intron_maturas2 (pfam01348), Toprim_2 (pfam13155), DUF3872 (pfam12988), Bac_Flav_CT_N (TIGR03780)

Seq: JH724132.1 Bacteroides dorei CL02T12C06 genomic scaffold supercont1.1, whole genome shotgun sequence (1316285 bp)
Overview 1 RT 1: 66155-82605 bp 2 RT 2: 192935-196423 bp 3 RT 3: 207591-212624 bp 4 RT 4: 229243-234611 bp 5 RT 5: 280513-285854 bp 6 RT 6: 1032358-1038672 bp Neighborhood of RT #1 [66155, 82605] AAA_25 RVT-GII Intron_maturas2 Toprim_2 DUF4134 DUF4134 RVT-GII Intron_maturas2 HNHc DUF4134 DUF4133 Bac_Flav_CT_G Bac_Flav_CT_G RVT_N RVT-GII GIIM Bac_Flav_CT_G Neighborhood of RT #2 [192935, 196491] DUF4134 DUF4134 RVT-GII Intron_maturas2 HNHc DUF4134 DUF4133 Neighborhood of RT #3 [207591, 212624] HTH_XRE Bac_Flav_CT_G Bac_Flav_CT_G RVT_N RVT-GII GIIM Bac_Flav_CT_G Neighborhood of RT #4 [229243, 234739] PriCT_2 DUF3987 RVT_N RVT-GII GIIM DUF4248 HU-HIG Neighborhood of RT #5 [280513, 289975] ArgoMid ArgoMid RVT-DGRs Laminin_G_3 Laminin_G_3 Neighborhood of RT #6 [1032358, 1038677] ADOP ADOP RVT-GII Intron_maturas2 HNHc ADOP Feature: gene Location: 66155-67210 bp Feature: domain Description: AAA_25 Location: 66296-66758 bp Feature: domain Description: AAA_25 Location: 66296-66758 bp Feature: gene Location: 67257-67439 bp Feature: gene Location: 67984-69792 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 68248-69070 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 68248-69070 bp Feature: domain Description: Intron_maturas2 Location: 69166-69451 bp Feature: domain Description: Intron_maturas2 Location: 69166-69451 bp Feature: gene Location: 69806-70624 bp Feature: domain Description: Toprim_2 Location: 70325-70607 bp Feature: domain Description: Toprim_2 Location: 703 25-70607 bp Feature: gene Location: 70880-71329 bp Feature: gene Location: 71368-71658 bp Feature: domain Description: DUF4134 Location: 71374-71644 bp Feature: domain Description: DUF413 4 Location: 713 74-71644 bp Feature: gene Location: 71710-71988 bp Feature: domain Description: DUF4134 Location: 71770-71971 bp Feature: domain Description: DUF413 4 Location: 71770-71971 bp Feature: gene Location: 72530-74341 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 72794-73616 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 72794-73 616 bp Feature: domain Description: Intron_maturas2 Location: 73805-74015 bp Feature: domain Description: Intron_maturas2 Location: 73 805-74015 bp Feature: domain Description: HNHc Note: nucleases Location: 74165-74270 bp Feature: domain Description: HNHc Note: nucleases Location: 74165-74270 bp Feature: gene Location: 74366-74557 bp Feature: domain Description: DUF4134 Location: 74456-74546 bp Feature: domain Description: DUF413 4 Location: 74456-74546 bp Feature: gene Location: 74570-74866 bp Feature: domain Description: DUF4133 Location: 74612-74789 bp Feature: domain Description: DUF413 3 Location: 74612-74789 bp Feature: gene Location: 74965-77124 bp Feature: domain Description: Bac_Flav_CT_G Location: 75106-76621 bp Feature: domain Description: Bac_Flav_CT_G Location: 75106-76621 bp Feature: domain Description: Bac_Flav_CT_G Location: 76699-77119 bp Feature: domain Description: Bac_Flav_CT_G Location: 76699-77119 bp Feature: gene Location: 77748-79403 bp Feature: RT Description: RVT_N Location: 77802-78045 bp Feature: RT Description: RVT_N Location: 77802-78045 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 78090-78738 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 78090-7873 8 bp Feature: domain Description: GIIM Note: maturase Location: 78789-79023 bp Feature: domain Description: GIIM Note: maturase Location: 78789-79023 bp Feature: gene Location: 79406-80083 bp Feature: domain Description: Bac_Flav_CT_G Location: 79523-79970 bp Feature: domain Description: Bac_Flav_CT_G Location: 79523 -79970 bp Feature: gene Location: 80080-82605 bp Feature: gene Location: 192935-193261 bp Feature: domain Description: DUF4134 Location: 192956-193247 bp Feature: domain Description: DUF413 4 Location: 192956-193 247 bp Feature: gene Location: 193341-193610 bp Feature: domain Description: DUF4134 Location: 193392-193593 bp Feature: domain Description: DUF413 4 Location: 193 3 92-193 593 bp Feature: gene Location: 194152-195963 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 194416-195238 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 194416-19523 8 bp Feature: domain Description: Intron_maturas2 Location: 195427-195637 bp Feature: domain Description: Intron_maturas2 Location: 195427-19563 7 bp Feature: domain Description: HNHc Note: nucleases Location: 195787-195892 bp Feature: domain Description: HNHc Note: nucleases Location: 195787-195892 bp Feature: gene Location: 195988-196182 bp Feature: domain Description: DUF4134 Location: 196078-196168 bp Feature: domain Description: DUF413 4 Location: 196078-196168 bp Feature: gene Location: 196195-196491 bp Feature: domain Description: DUF4133 Location: 196237-196423 bp Feature: domain Description: DUF413 3 Location: 19623 7-196423 bp Feature: gene Location: 207591-207791 bp Feature: domain Description: HTH_XRE Location: 207594-207762 bp Feature: domain Description: HTH_XRE Location: 207594-207762 bp Feature: gene Location: 208198-208992 bp Feature: domain Description: Bac_Flav_CT_G Location: 208201-208486 bp Feature: domain Description: Bac_Flav_CT_G Location: 208201-208486 bp Feature: domain Description: Bac_Flav_CT_G Location: 208543-208987 bp Feature: domain Description: Bac_Flav_CT_G Location: 208543 -208987 bp Feature: gene Location: 209616-211271 bp Feature: RT Description: RVT_N Location: 209670-209913 bp Feature: RT Description: RVT_N Location: 209670-209913 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 209958-210606 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 209958-210606 bp Feature: domain Description: GIIM Note: maturase Location: 210657-210891 bp Feature: domain Description: GIIM Note: maturase Location: 210657-210891 bp Feature: gene Location: 211274-211936 bp Feature: domain Description: Bac_Flav_CT_G Location: 211391-211835 bp Feature: domain Description: Bac_Flav_CT_G Location: 2113 91-21183 5 bp Feature: gene Location: 211944-212624 bp Feature: gene Location: 229243-231048 bp Feature: domain Description: PriCT_2 Location: 229285-229510 bp Feature: domain Description: PriCT_2 Location: 229285-229510 bp Feature: domain Description: DUF3987 Location: 229768-230839 bp Feature: domain Description: DUF3 987 Location: 229768-23 083 9 bp Feature: gene Location: 231175-231333 bp Feature: gene Location: 231330-232985 bp Feature: RT Description: RVT_N Location: 231387-231624 bp Feature: RT Description: RVT_N Location: 23 13 87-23 1624 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 231675-232323 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 23 1675-23 23 23 bp Feature: domain Description: GIIM Note: maturase Location: 232380-232611 bp Feature: domain Description: GIIM Note: maturase Location: 23 23 80-23 2611 bp Feature: gene Location: 233680-233874 bp Feature: domain Description: DUF4248 Location: 233683-233872 bp Feature: domain Description: DUF4248 Location: 23 3 683 -23 3 872 bp Feature: gene Location: 234245-234739 bp Feature: domain Description: HU-HIG Location: 234251-234611 bp Feature: domain Description: HU-HIG Location: 23 4251-23 4611 bp Feature: gene Location: 280513-280755 bp Feature: domain Description: ArgoMid Location: 280528-280636 bp Feature: domain Description: ArgoMid Location: 280528-28063 6 bp Feature: domain Description: ArgoMid Location: 280651-280750 bp Feature: domain Description: ArgoMid Location: 280651-280750 bp Feature: gene Location: 280935-281420 bp Feature: gene Location: 281417-282721 bp Feature: RT Description: RVT-DGRs Note: DGRs RT Location: 281627-282305 bp Feature: RT Description: RVT-DGRs Note: DGRs RT Location: 281627-2823 05 bp Feature: gene Location: 283047-283241 bp Feature: gene Location: 283238-289975 bp Feature: domain Description: Laminin_G_3 Location: 284699-284777 bp Feature: domain Description: Laminin_G_3 Location: 284699-284777 bp Feature: domain Description: Laminin_G_3 Location: 285428-285854 bp Feature: domain Description: Laminin_G_3 Location: 285428-285854 bp Feature: gene Location: 1032358-1033614 bp Feature: domain Description: ADOP Location: 1032382-1033609 bp Feature: domain Description: ADOP Location: 103 23 82-103 3 609 bp Feature: gene Location: 1033637-1034428 bp Feature: domain Description: ADOP Location: 1033685-1034426 bp Feature: domain Description: ADOP Location: 103 3 685-103 4426 bp Feature: gene Location: 1035054-1036865 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1035318-1036140 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 103 53 18-103 6140 bp Feature: domain Description: Intron_maturas2 Location: 1036329-1036539 bp Feature: domain Description: Intron_maturas2 Location: 103 63 29-103 653 9 bp Feature: domain Description: HNHc Note: nucleases Location: 1036689-1036794 bp Feature: domain Description: HNHc Note: nucleases Location: 103 6689-103 6794 bp Feature: gene Location: 1036836-1037393 bp Feature: gene Location: 1037397-1038677 bp Feature: domain Description: ADOP Location: 1037424-1038672 bp Feature: domain Description: ADOP Location: 103 7424-103 8672 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT AAA_25 (pfam13481), RVT-GII, Intron_maturas2 (pfam01348), Toprim_2 (pfam13155), DUF4134 (pfam13572), HNHc (smart00507), DUF4133 (pfam13571), Bac_Flav_CT_G (TIGR03783), RVT_N (pfam13655), GIIM (pfam08388)
HTH_XRE (smart00530), PriCT_2 (pfam08707), DUF3987 (pfam13148), DUF4248 (pfam14053), HU-HIG (pfam18291), ArgoMid (pfam16487), RVT-DGRs, Laminin_G_3 (pfam13385), ADOP (TIGR03434)

Seq: JH724133.1 Bacteroides dorei CL02T12C06 genomic scaffold supercont1.2, whole genome shotgun sequence (1113499 bp)
Overview 1 RT 1: 851047-858607 bp Neighborhood of RT #1 [851047, 858789] RVT-CRISPR-like OMP_RagA_SusC SusD Feature: gene Location: 851047-851241 bp Feature: gene Location: 851574-851675 bp Feature: gene Location: 852060-853334 bp Feature: RT Description: RVT-CRISPR-like Note: CRISPR-like RT Location: 852267-852909 bp Feature: RT Description: RVT-CRISPR-like Note: CRISPR-like RT Location: 852267-852909 bp Feature: gene Location: 853857-857033 bp Feature: domain Description: OMP_RagA_SusC Location: 853932-857025 bp Feature: domain Description: OMP_RagA_SusC Location: 853932-857025 bp Feature: gene Location: 857062-858789 bp Feature: domain Description: SusD Location: 857287-858607 bp Feature: domain Description: SusD Location: 857287-858607 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-CRISPR, OMP_RagA_SusC (TIGR04056), SusD (NF033071)

Seq: JH724135.1 Bacteroides dorei CL02T12C06 genomic scaffold supercont1.4, whole genome shotgun sequence (663095 bp)
Overview 1 RT 1: 141457-146478 bp 2 RT 2: 435320-438752 bp 3 RT 3: 526510-534387 bp Neighborhood of RT #1 [141457, 146478] Phage_head_fibr RVT_N RVT-GII GIIM Phage_head_fibr Neighborhood of RT #2 [435320, 438829] DUF4134 RVT-GII Intron_maturas2 HNHc DUF4134 DUF4133 Neighborhood of RT #3 [526510, 534387] Mfa_like_1 Mfa2 RVT_N RVT-GII GIIM DUF4906 Feature: gene Location: 141457-142092 bp Feature: gene Location: 142097-142330 bp Feature: domain Description: Phage_head_fibr Location: 142112-142304 bp Feature: domain Description: Phage_head_fibr Location: 142112-142304 bp Feature: gene Location: 142946-144601 bp Feature: RT Description: RVT_N Location: 143003-143240 bp Feature: RT Description: RVT_N Location: 143003-143240 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 143291-143939 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 143291-143939 bp Feature: domain Description: GIIM Note: maturase Location: 143996-144227 bp Feature: domain Description: GIIM Note: maturase Location: 143996-144227 bp Feature: gene Location: 144598-145377 bp Feature: domain Description: Phage_head_fibr Location: 144742-145372 bp Feature: domain Description: Phage_head_fibr Location: 144742-145 372 bp Feature: gene Location: 145396-146478 bp Feature: gene Location: 435320-435646 bp Feature: gene Location: 435694-435948 bp Feature: domain Description: DUF4134 Location: 435730-435931 bp Feature: domain Description: DUF4134 Location: 435 730-435 931 bp Feature: gene Location: 436490-438301 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 436754-437576 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 43675 4-4375 76 bp Feature: domain Description: Intron_maturas2 Location: 437765-437975 bp Feature: domain Description: Intron_maturas2 Location: 437765 -437975 bp Feature: domain Description: HNHc Note: nucleases Location: 438125-438230 bp Feature: domain Description: HNHc Note: nucleases Location: 438125 -438230 bp Feature: gene Location: 438326-438520 bp Feature: domain Description: DUF4134 Location: 438416-438506 bp Feature: domain Description: DUF4134 Location: 438416-4385 06 bp Feature: gene Location: 438533-438829 bp Feature: domain Description: DUF4133 Location: 438575-438752 bp Feature: domain Description: DUF4133 Location: 4385 75 -43875 2 bp Feature: gene Location: 526510-527502 bp Feature: domain Description: Mfa_like_1 Location: 526669-527470 bp Feature: domain Description: Mfa_like_1 Location: 5 26669-5 27470 bp Feature: gene Location: 527538-528578 bp Feature: domain Description: Mfa2 Location: 527682-528363 bp Feature: domain Description: Mfa2 Location: 5 27682-5 28363 bp Feature: gene Location: 528511-530166 bp Feature: RT Description: RVT_N Location: 528568-528805 bp Feature: RT Description: RVT_N Location: 5 285 68-5 28805 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 528856-529504 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 5 2885 6-5 295 04 bp Feature: domain Description: GIIM Note: maturase Location: 529561-529792 bp Feature: domain Description: GIIM Note: maturase Location: 5 295 61-5 29792 bp Feature: gene Location: 531068-534070 bp Feature: domain Description: DUF4906 Location: 531452-532214 bp Feature: domain Description: DUF4906 Location: 5 3145 2-5 32214 bp Feature: gene Location: 534157-534387 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT Phage_head_fibr (pfam11133), RVT_N (pfam13655), RVT-GII, GIIM (pfam08388), DUF4134 (pfam13572), Intron_maturas2 (pfam01348), HNHc (smart00507), DUF4133 (pfam13571), Mfa_like_1 (pfam13149), Mfa2 (pfam08842)
DUF4906 (pfam16249)

Seq: JH724140.1 Bacteroides dorei CL02T12C06 genomic scaffold supercont1.9, whole genome shotgun sequence (211377 bp)
Overview 1 RT 1: 9445-13800 bp 2 RT 2: 64246-73396 bp Neighborhood of RT #1 [9445, 13800] Bac_Flav_CT_G RVT_N RVT-GII GIIM Bac_Flav_CT_G Neighborhood of RT #2 [64246, 73422] DUF4134 RVT_N RVT-GII GIIM DUF4134 DUF4133 Bac_Flav_CT_G RVT_N RVT-GII GIIM Bac_Flav_CT_G DUF3876 Feature: gene Location: 9445-9576 bp Feature: gene Location: 9583-10191 bp Feature: domain Description: Bac_Flav_CT_G Location: 9700-10159 bp Feature: domain Description: Bac_Flav_CT_G Location: 9700-10159 bp Feature: gene Location: 10194-11849 bp Feature: RT Description: RVT_N Location: 10248-10491 bp Feature: RT Description: RVT_N Location: 10248-10491 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 10536-11184 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 10536 -11184 bp Feature: domain Description: GIIM Note: maturase Location: 11235-11469 bp Feature: domain Description: GIIM Note: maturase Location: 11235-1146 9 bp Feature: gene Location: 12473-13267 bp Feature: domain Description: Bac_Flav_CT_G Location: 12476-13262 bp Feature: domain Description: Bac_Flav_CT_G Location: 12476 -1326 2 bp Feature: gene Location: 13426-13800 bp Feature: gene Location: 64246-64908 bp Feature: gene Location: 65079-65294 bp Feature: domain Description: DUF4134 Location: 65097-65280 bp Feature: domain Description: DUF4134 Location: 6 5097-6 5280 bp Feature: gene Location: 65910-67565 bp Feature: RT Description: RVT_N Location: 65967-66204 bp Feature: RT Description: RVT_N Location: 6 596 7-6 6 204 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 66255-66903 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 6 6 255-6 6 903 bp Feature: domain Description: GIIM Note: maturase Location: 66960-67191 bp Feature: domain Description: GIIM Note: maturase Location: 6 6 96 0-6 7191 bp Feature: gene Location: 67562-67804 bp Feature: domain Description: DUF4134 Location: 67709-67799 bp Feature: domain Description: DUF4134 Location: 6 7709-6 7799 bp Feature: gene Location: 67815-68150 bp Feature: domain Description: DUF4133 Location: 67833-68100 bp Feature: domain Description: DUF4133 Location: 6 7833-6 8100 bp Feature: gene Location: 68147-70177 bp Feature: domain Description: Bac_Flav_CT_G Location: 68150-70172 bp Feature: domain Description: Bac_Flav_CT_G Location: 6 8150-70172 bp Feature: gene Location: 70801-72456 bp Feature: RT Description: RVT_N Location: 70855-71098 bp Feature: RT Description: RVT_N Location: 70855-71098 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 71143-71791 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 71143-71791 bp Feature: domain Description: GIIM Note: maturase Location: 71842-72076 bp Feature: domain Description: GIIM Note: maturase Location: 71842-72076 bp Feature: gene Location: 72459-73070 bp Feature: domain Description: Bac_Flav_CT_G Location: 72576-73035 bp Feature: domain Description: Bac_Flav_CT_G Location: 72576 -73035 bp Feature: gene Location: 73072-73422 bp Feature: domain Description: DUF3876 Location: 73129-73396 bp Feature: domain Description: DUF3876 Location: 73129-73396 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT_N (pfam13655), RVT-GII, GIIM (pfam08388), Bac_Flav_CT_G (TIGR03783), DUF4134 (pfam13572), DUF4133 (pfam13571), DUF3876 (pfam12992)