myRT

myRT report for GCA_000273135.1_Bact_frag_CL05T12C13_V1

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Seq: JH724193.1 Bacteroides fragilis CL05T12C13 genomic scaffold supercont1.1, whole genome shotgun sequence (2643952 bp)
Overview 1 RT 1: 1246945-1255904 bp Neighborhood of RT #1 [1246945, 1255912] GlnA3 RVT-Retrons rpsA RNase_Z Feature: gene Location: 1246945-1249134 bp Feature: domain Description: GlnA3 Location: 1247020-1249132 bp Feature: domain Description: GlnA3 Location: 1 247020-1 2491 32 bp Feature: gene Location: 1249374-1251593 bp Feature: gene Location: 1251800-1252912 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 1252115-1252664 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 1 2521 1 5-1 252664 bp Feature: gene Location: 1253054-1254847 bp Feature: domain Description: rpsA Location: 1253132-1254740 bp Feature: domain Description: rpsA Location: 1 2531 32-1 254740 bp Feature: gene Location: 1254998-1255912 bp Feature: domain Description: RNase_Z Location: 1255013-1255904 bp Feature: domain Description: RNase_Z Location: 1 25501 3-1 255904 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT GlnA3 (COG3968), RVT-Retrons, rpsA (TIGR00717), RNase_Z (TIGR02651)

Seq: JH724198.1 Bacteroides fragilis CL05T12C13 genomic scaffold supercont1.6, whole genome shotgun sequence (253254 bp)
Overview 1 RT 1: 238266-247903 bp Neighborhood of RT #1 [238266, 247962] PRK13351 PRK13351 ACT_CBS RVT_N RVT-GII GIIM COG4646 Phage_int_SAM_1 INT_RitA_C_like Feature: gene Location: 238266-240191 bp Feature: domain Description: PRK13351 Location: 238269-238737 bp Feature: domain Description: PRK13351 Location: 2 382 69-2 38737 bp Feature: domain Description: PRK13351 Location: 238782-240108 bp Feature: domain Description: PRK13351 Location: 2 38782 -2 40108 bp Feature: gene Location: 240849-242114 bp Feature: domain Description: ACT_CBS Location: 241332-241512 bp Feature: domain Description: ACT_CBS Location: 2 41332 -2 41512 bp Feature: gene Location: 242116-243783 bp Feature: RT Description: RVT_N Location: 242170-242413 bp Feature: RT Description: RVT_N Location: 2 42 170-2 42 413 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 242458-243106 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 2 42 458-2 43106 bp Feature: domain Description: GIIM Note: maturase Location: 243160-243391 bp Feature: domain Description: GIIM Note: maturase Location: 2 43160-2 43391 bp Feature: gene Location: 244443-246470 bp Feature: domain Description: COG4646 Location: 244587-246087 bp Feature: domain Description: COG4646 Location: 2 44587-2 46087 bp Feature: gene Location: 246697-247962 bp Feature: domain Description: Phage_int_SAM_1 Location: 247045-247285 bp Feature: domain Description: Phage_int_SAM_1 Location: 2 47045-2 472 85 bp Feature: domain Description: INT_RitA_C_like Location: 247372-247903 bp Feature: domain Description: INT_RitA_C_like Location: 2 47372 -2 47903 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT PRK13351 (elongation factor G-like protein), ACT_CBS (cd04884), RVT_N (pfam13655), RVT-GII, GIIM (pfam08388), COG4646 (Adenine-specific DNA methylase, N12 class ), Phage_int_SAM_1 (pfam02899), INT_RitA_C_like (cd01188)