myRT

myRT report for GCA_000273155.1_Bact_frag_CL07T12C05_V1

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Seq: JH724216.1 Bacteroides fragilis CL07T12C05 genomic scaffold supercont1.2, whole genome shotgun sequence (700938 bp)
Overview 1 RT 1: 560706-564853 bp Neighborhood of RT #1 [560706, 564853] TipAS COG2369 LPD3 RVT-DGRs Feature: gene Location: 560706-561917 bp Ori: EIY93099.1 Feature: domain Description: TipAS Location: 560730-561033 bp Feature: domain Description: TipAS Location: 560730-561 033 bp Feature: domain Description: COG2369 Location: 561153-561339 bp Feature: domain Description: COG2369 Location: 561 1 53-561 339 bp Feature: domain Description: LPD3 Location: 561558-561840 bp Feature: domain Description: LPD3 Location: 561 558-561 840 bp Feature: gene Location: 562015-562248 bp Feature: gene Location: 562624-563925 bp Ori: EIY93101.1 Feature: RT Description: RVT-DGRs Note: DGRs RT Location: 562837-563434 bp Feature: RT Description: RVT-DGRs Note: DGRs RT Location: 562837-563434 bp Feature: gene Location: 563922-564407 bp Feature: gene Location: 564668-564853 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT TipAS (pfam07739), COG2369 (Uncharacterized conserved protein, contains phage Mu gpF-like domain ), LPD3 (pfam18798), RVT-DGRs

Seq: JH724215.1 Bacteroides fragilis CL07T12C05 genomic scaffold supercont1.1, whole genome shotgun sequence (3416594 bp)
Overview 1 RT 1: 1323023-1331981 bp 2 RT 2: 1487524-1490928 bp 3 RT 3: 2573402-2577824 bp Neighborhood of RT #1 [1323023, 1331989] GlnA3 RVT-Retrons rpsA RNase_Z Neighborhood of RT #2 [1487524, 1490996] HTH_17 RVT-Retrons COG3943 Neighborhood of RT #3 [2573402, 2577824] RVT-DGRs Feature: gene Location: 1323023-1325212 bp Ori: EIY99739.1 Feature: domain Description: GlnA3 Location: 1323098-1325210 bp Feature: domain Description: GlnA3 Location: 132 3098-132 52 10 bp Feature: gene Location: 1325452-1327671 bp Feature: gene Location: 1327878-1328990 bp Ori: EIY99741.1 Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 1328193-1328742 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 132 8193-132 8742 bp Feature: gene Location: 1329132-1330925 bp Ori: EIY99742.1 Feature: domain Description: rpsA Location: 1329210-1330818 bp Feature: domain Description: rpsA Location: 132 92 10-1330818 bp Feature: gene Location: 1331075-1331989 bp Ori: EIY99743.1 Feature: domain Description: RNase_Z Location: 1331090-1331981 bp Feature: domain Description: RNase_Z Location: 1331090-1331981 bp Feature: gene Location: 1487524-1487889 bp Ori: EIY99873.1 Feature: domain Description: HTH_17 Location: 1487659-1487797 bp Feature: domain Description: HTH_17 Location: 1487659-1487797 bp Feature: gene Location: 1488355-1488570 bp Feature: gene Location: 1488596-1489453 bp Ori: EIY99875.1 Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 1488758-1489283 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 1488758-14892 83 bp Feature: gene Location: 1489484-1490365 bp Feature: gene Location: 1490631-1490996 bp Ori: EIY99877.1 Feature: domain Description: COG3943 Location: 1490670-1490928 bp Feature: domain Description: COG3943 Location: 1490670-149092 8 bp Feature: gene Location: 2573402-2574424 bp Feature: gene Location: 2574445-2575764 bp Feature: gene Location: 2576281-2577096 bp Ori: EIY96243.1 Feature: RT Description: RVT-DGRs Note: DGRs RT Location: 2576614-2576938 bp Feature: RT Description: RVT-DGRs Note: DGRs RT Location: 2 576614-2 576938 bp Feature: gene Location: 2577116-2577292 bp Feature: gene Location: 2577477-2577824 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT GlnA3 (COG3968), RVT-Retrons, rpsA (TIGR00717), RNase_Z (TIGR02651), HTH_17 (pfam12728), COG3943 (Uncharacterized conserved protein ), RVT-DGRs