myRT

myRT report for GCA_000273465.1_PB_Bact_egge_1_2_48FAA_V1

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Seq: AKBX01000001.1 Bacteroides eggerthii 1_2_48FAA cont1.1, whole genome shotgun sequence (1300797 bp)
Overview 1 RT 1: 477665-482012 bp 2 RT 2: 871517-876971 bp Neighborhood of RT #1 [477665, 482012] RVT-GII Intron_maturas2 DUF1738 MPTase-PolyVal Neighborhood of RT #2 [871517, 876988] DUF3876 Bac_Flav_CT_G RVT-GII Intron_maturas2 HNHc Bac_Flav_CT_G Feature: gene Location: 477665-477898 bp Feature: gene Location: 477903-478157 bp Feature: gene Location: 478171-479976 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 478435-479257 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 478435-479257 bp Feature: domain Description: Intron_maturas2 Location: 479434-479656 bp Feature: domain Description: Intron_maturas2 Location: 479434-479656 bp Feature: gene Location: 479969-481585 bp Feature: domain Description: DUF1738 Location: 480095-480371 bp Feature: domain Description: DUF1 738 Location: 480095-480371 bp Feature: domain Description: MPTase-PolyVal Location: 480533-480845 bp Feature: domain Description: MPTase-PolyVal Location: 480533-480845 bp Feature: gene Location: 481644-482012 bp Feature: gene Location: 871517-871924 bp Feature: domain Description: DUF3876 Location: 871622-871883 bp Feature: domain Description: DUF3876 Location: 871 622-871 883 bp Feature: gene Location: 871959-872597 bp Feature: domain Description: Bac_Flav_CT_G Location: 872013-872580 bp Feature: domain Description: Bac_Flav_CT_G Location: 87201 3-872580 bp Feature: gene Location: 872657-874468 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 872921-873743 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 872921 -873743 bp Feature: domain Description: Intron_maturas2 Location: 873812-874148 bp Feature: domain Description: Intron_maturas2 Location: 87381 2-8741 48 bp Feature: domain Description: HNHc Note: nucleases Location: 874289-874439 bp Feature: domain Description: HNHc Note: nucleases Location: 874289-874439 bp Feature: gene Location: 874870-875013 bp Feature: gene Location: 875045-876988 bp Feature: domain Description: Bac_Flav_CT_G Location: 875048-876971 bp Feature: domain Description: Bac_Flav_CT_G Location: 875048-876971 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, Intron_maturas2 (pfam01348), DUF1738 (pfam08401), MPTase-PolyVal (pfam18818), DUF3876 (pfam12992), Bac_Flav_CT_G (TIGR03783), HNHc (smart00507)

Seq: AKBX01000002.1 Bacteroides eggerthii 1_2_48FAA cont1.2, whole genome shotgun sequence (631554 bp)
Overview 1 RT 1: 288383-292316 bp 2 RT 2: 596193-604550 bp Neighborhood of RT #1 [288383, 292316] RVT-UG27 Neighborhood of RT #2 [596193, 605119] RVT-UG8 RVT-UG3 Arm-DNA-bind_5 Phage_int_SAM_5 INTN1_C_like Feature: gene Location: 288383-289030 bp Feature: gene Location: 289044-289712 bp Feature: gene Location: 289705-290967 bp Feature: RT Description: RVT-UG27 Note: UG27 RT Location: 289897-290533 bp Feature: RT Description: RVT-UG2 7 Note: UG2 7 RT Location: 2 89897-2 90533 bp Feature: gene Location: 291290-291787 bp Feature: gene Location: 291837-292316 bp Feature: gene Location: 596193-596519 bp Feature: gene Location: 596536-596970 bp Feature: gene Location: 597860-599779 bp Feature: RT Description: RVT-UG8 Note: UG8 RT Location: 598367-598802 bp Feature: RT Description: RVT-UG8 Note: UG8 RT Location: 598367-598802 bp Feature: gene Location: 599776-601074 bp Feature: RT Description: RVT-UG3 Note: UG3 RT Location: 600136-600607 bp Feature: RT Description: RVT-UG3 Note: UG3 RT Location: 600136-600607 bp Feature: gene Location: 602588-602731 bp Feature: gene Location: 603230-605119 bp Feature: domain Description: Arm-DNA-bind_5 Location: 603398-603623 bp Feature: domain Description: Arm-DNA-bind_5 Location: 603398-60362 3 bp Feature: domain Description: Phage_int_SAM_5 Location: 603695-603995 bp Feature: domain Description: Phage_int_SAM_5 Location: 603695-603995 bp Feature: domain Description: INTN1_C_like Location: 604043-604550 bp Feature: domain Description: INTN1_C_like Location: 604043-604550 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-UG27, RVT-UG8, RVT-UG3, Arm-DNA-bind_5 (pfam17293), Phage_int_SAM_5 (pfam13102), INTN1_C_like (cd01185)