myRT

myRT report for GCA_000273765.1_Bact_frag_CL05T00C42_V1

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Seq: JH724188.1 Bacteroides fragilis CL05T00C42 genomic scaffold supercont1.1, whole genome shotgun sequence (2641955 bp)
Overview 1 RT 1: 1299613-1308578 bp Neighborhood of RT #1 [1299613, 1308580] RNase_Z rpsA RVT-Retrons GlnA3 Feature: gene Location: 1299613-1300527 bp Feature: domain Description: RNase_Z Location: 1299628-1300519 bp Feature: domain Description: RNase_Z Location: 1 299628-1 30051 9 bp Feature: gene Location: 1300678-1302471 bp Feature: domain Description: rpsA Location: 1300756-1302364 bp Feature: domain Description: rpsA Location: 1 300756-1 302364 bp Feature: gene Location: 1302613-1303725 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 1302928-1303477 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 1 302928-1 303477 bp Feature: gene Location: 1303932-1306151 bp Feature: gene Location: 1306391-1308580 bp Feature: domain Description: GlnA3 Location: 1306466-1308578 bp Feature: domain Description: GlnA3 Location: 1 306466-1 308578 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RNase_Z (TIGR02651), rpsA (TIGR00717), RVT-Retrons, GlnA3 (COG3968)

Seq: JH724189.1 Bacteroides fragilis CL05T00C42 genomic scaffold supercont1.2, whole genome shotgun sequence (1366195 bp)
Overview 1 RT 1: 238171-247808 bp Neighborhood of RT #1 [238171, 247867] PRK13351 PRK13351 ACT_CBS RVT_N RVT-GII GIIM COG4646 Phage_int_SAM_1 INT_RitA_C_like Feature: gene Location: 238171-240096 bp Feature: domain Description: PRK13351 Location: 238174-238642 bp Feature: domain Description: PRK13351 Location: 2 38174-2 38642 bp Feature: domain Description: PRK13351 Location: 238687-240013 bp Feature: domain Description: PRK13351 Location: 2 38687-2 40013 bp Feature: gene Location: 240754-242019 bp Feature: domain Description: ACT_CBS Location: 241237-241417 bp Feature: domain Description: ACT_CBS Location: 2 412 37-2 41417 bp Feature: gene Location: 242021-243688 bp Feature: RT Description: RVT_N Location: 242075-242318 bp Feature: RT Description: RVT_N Location: 2 42 075-2 42 318 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 242363-243011 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 2 42 363-2 43011 bp Feature: domain Description: GIIM Note: maturase Location: 243065-243296 bp Feature: domain Description: GIIM Note: maturase Location: 2 43065-2 432 96 bp Feature: gene Location: 244348-246375 bp Feature: domain Description: COG4646 Location: 244492-245992 bp Feature: domain Description: COG4646 Location: 2 44492 -2 45992 bp Feature: gene Location: 246602-247867 bp Feature: domain Description: Phage_int_SAM_1 Location: 246950-247190 bp Feature: domain Description: Phage_int_SAM_1 Location: 2 46950-2 47190 bp Feature: domain Description: INT_RitA_C_like Location: 247277-247808 bp Feature: domain Description: INT_RitA_C_like Location: 2 472 77-2 47808 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT PRK13351 (elongation factor G-like protein), ACT_CBS (cd04884), RVT_N (pfam13655), RVT-GII, GIIM (pfam08388), COG4646 (Adenine-specific DNA methylase, N12 class ), Phage_int_SAM_1 (pfam02899), INT_RitA_C_like (cd01188)