myRT

myRT report for GCA_000275705.1_VibHar1.0

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Seq: JH720473.1 Vibrio harveyi ZJ0603 genomic scaffold Scaffold3, whole genome shotgun sequence (968732 bp)
Overview 1 RT 1: 425939-428321 bp 2 RT 2: 846618-853822 bp 3 RT 3: 959784-963206 bp Neighborhood of RT #1 [425939, 428321] RVT-GII GIIM AAA_15 Neighborhood of RT #2 [846618, 853822] SMC_prok_A RVT-UG8 DDE_Tnp_1 RVT-UG3 GltP Neighborhood of RT #3 [959784, 963206] DUF3265 RVT-UG2 GAT1_Peptidase_E Feature: gene Location: 425939-426067 bp Feature: gene Location: 426078-426326 bp Feature: gene Location: 426335-426655 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 426347-426458 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 426347-426458 bp Feature: domain Description: GIIM Note: maturase Location: 426518-426647 bp Feature: domain Description: GIIM Note: maturase Location: 42651 8-426647 bp Feature: gene Location: 427486-427866 bp Feature: domain Description: AAA_15 Location: 427561-427813 bp Feature: domain Description: AAA_1 5 Location: 427561 -42781 3 bp Feature: gene Location: 427863-428321 bp Feature: gene Location: 846618-847907 bp Feature: domain Description: SMC_prok_A Location: 847131-847869 bp Feature: domain Description: SMC_prok_A Location: 8471 31 -847869 bp Feature: gene Location: 848619-849533 bp Feature: gene Location: 849594-850394 bp Feature: RT Description: RVT-UG8 Note: UG8 RT Location: 849939-850392 bp Feature: RT Description: RVT-UG8 Note: UG8 RT Location: 849939-850392 bp Feature: gene Location: 850645-851133 bp Feature: gene Location: 851204-851893 bp Feature: domain Description: DDE_Tnp_1 Location: 851465-851666 bp Feature: domain Description: DDE_Tnp_1 Location: 851 465-851 666 bp Feature: gene Location: 852223-853068 bp Feature: RT Description: RVT-UG3 Note: UG3 RT Location: 852670-853015 bp Feature: RT Description: RVT-UG3 Note: UG3 RT Location: 852670-85301 5 bp Feature: gene Location: 853176-853442 bp Feature: domain Description: GltP Location: 853182-853434 bp Feature: domain Description: GltP Location: 8531 82-853434 bp Feature: gene Location: 853694-853822 bp Feature: gene Location: 959784-959951 bp Feature: gene Location: 959913-960281 bp Feature: domain Description: DUF3265 Location: 960198-960279 bp Feature: domain Description: DUF3265 Location: 9601 98-960279 bp Feature: gene Location: 960630-961913 bp Feature: RT Description: RVT-UG2 Note: UG2 RT Location: 960831-961614 bp Feature: RT Description: RVT-UG2 Note: UG2 RT Location: 960831 -961 61 4 bp Feature: gene Location: 962064-962708 bp Feature: domain Description: GAT1_Peptidase_E Location: 962079-962664 bp Feature: domain Description: GAT1 _Peptidase_E Location: 962079-962664 bp Feature: gene Location: 962847-963206 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, GIIM (pfam08388), AAA_15 (pfam13175), SMC_prok_A (TIGR02169), RVT-UG8, DDE_Tnp_1 (pfam01609), RVT-UG3, GltP (COG1301), DUF3265 (pfam11665), RVT-UG2
GAT1_Peptidase_E (cd03146)