myRT

myRT report for GCA_000275825.1_ASM27582v1

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Seq: JH719942.1 Saprospira grandis DSM 2844 genomic scaffold Sapgrscaffold_2, whole genome shotgun sequence (4422561 bp)
Overview 1 RT 1: 2165744-2172453 bp 2 RT 2: 2902143-2911629 bp Neighborhood of RT #1 [2165744, 2172453] RVT-Retrons dnaG Neighborhood of RT #2 [2902143, 2911629] WGR_DNA_ligase SWIM RVT-Retrons acidPPc Feature: gene Location: 2165744-2166619 bp Feature: gene Location: 2166636-2166953 bp Feature: gene Location: 2166973-2168001 bp Ori: EJF53476.1 Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 2167198-2167750 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 21 671 98-21 67750 bp Feature: gene Location: 2169308-2171359 bp Ori: EJF53477.1 Feature: domain Description: dnaG Location: 2169314-2171261 bp Feature: domain Description: dnaG Location: 21 6931 4-21 71 261 bp Feature: gene Location: 2171875-2172453 bp Feature: gene Location: 2902143-2905313 bp Ori: EJF54044.1 Feature: domain Description: WGR_DNA_ligase Location: 2902164-2902380 bp Feature: domain Description: WGR_DNA_ligase Location: 29021 64-2902380 bp Feature: gene Location: 2905325-2906992 bp Ori: EJF54045.1 Feature: domain Description: SWIM Location: 2906840-2906951 bp Feature: domain Description: SWIM Location: 2906840-2906951 bp Feature: gene Location: 2907625-2909199 bp Ori: EJF54046.1 Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 2908174-2908783 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 29081 74-2908783 bp Feature: gene Location: 2909606-2910340 bp Ori: EJF54047.1 Feature: domain Description: acidPPc Location: 2910098-2910290 bp Feature: domain Description: acidPPc Location: 291 0098-291 0290 bp Feature: gene Location: 2910349-2911629 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-Retrons, dnaG (TIGR01391), WGR_DNA_ligase (cd07998), SWIM (pfam04434), acidPPc (smart00014)