myRT

myRT report for GCA_000275925.1_ASM27592v1

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Seq: AJXH01000070.1 Pseudomonas fluorescens NZ052 contig00072_contig_1, whole genome shotgun sequence (54595 bp)
Overview 1 RT 1: 43618-47691 bp Neighborhood of RT #1 [43618, 48011] Acetyltransf_1 FkpA RVT-Retrons Trypsin_2 Resolvase Feature: gene Location: 43618-44226 bp Feature: domain Description: Acetyltransf_1 Location: 43693-44086 bp Feature: domain Description: Acetyltransf_1 Location: 43693-44086 bp Feature: gene Location: 44232-44378 bp Feature: domain Description: FkpA Location: 44238-44361 bp Feature: domain Description: FkpA Location: 44238-44361 bp Feature: gene Location: 44597-45328 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 44750-45320 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 44750-45320 bp Feature: gene Location: 45439-46326 bp Feature: domain Description: Trypsin_2 Location: 45745-46219 bp Feature: domain Description: Trypsin_2 Location: 45745-4621 9 bp Feature: gene Location: 47286-48011 bp Feature: domain Description: Resolvase Location: 47298-47691 bp Feature: domain Description: Resolvase Location: 47298-47691 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT Acetyltransf_1 (pfam00583), FkpA (COG0545), RVT-Retrons, Trypsin_2 (pfam13365), Resolvase (smart00857)

Seq: AJXH01000359.1 Pseudomonas fluorescens NZ052 contig00404_contig_1, whole genome shotgun sequence (574 bp)
Overview 1 RT 1: 248-386 bp Neighborhood of RT #1 [248, 409] RVT-CRISPR-like Feature: gene Location: 248-409 bp Feature: RT Description: RVT-CRISPR-like Note: CRISPR-like RT Location: 257-386 bp Feature: RT Description: RVT-CRISPR-like Note: CRISPR-like RT Location: 2 57-386 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-CRISPR

Seq: AJXH01000412.1 Pseudomonas fluorescens NZ052 contig00470_contig_1, whole genome shotgun sequence (56425 bp)
Overview 1 RT 1: 8165-13977 bp Neighborhood of RT #1 [8165, 13977] RVT-UG7 Feature: gene Location: 8165-8881 bp Feature: gene Location: 8939-9673 bp Feature: gene Location: 9663-11291 bp Feature: RT Description: RVT-UG7 Note: UG7 RT Location: 10083-10500 bp Feature: RT Description: RVT-UG7 Note: UG7 RT Location: 10083 -10500 bp Feature: gene Location: 11529-11975 bp Feature: gene Location: 12622-13977 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-UG7