myRT

myRT report for GCA_000276565.1_ASM27656v1

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Seq: AJXG01000053.1 Pseudomonas tolaasii PMS117 contig00055_contig_1, whole genome shotgun sequence (1924 bp)
Overview 1 RT 1: 74-1262 bp Neighborhood of RT #1 [74, 1429] RVT-GII GIIM Feature: gene Location: 74-1429 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 365-980 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 365-980 bp Feature: domain Description: GIIM Note: maturase Location: 1034-1262 bp Feature: domain Description: GIIM Note: maturase Location: 1 034-1 262 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, GIIM (pfam08388)

Seq: AJXG01000297.1 Pseudomonas tolaasii PMS117 contig00316_contig_1, whole genome shotgun sequence (301961 bp)
Overview 1 RT 1: 80437-90346 bp Neighborhood of RT #1 [80437, 90531] AAA_13 INT_RitA_C_like RVT-UG5 nitrilase KAP_NTPase HTH_XRE ImmA Feature: gene Location: 80437-82590 bp Feature: domain Description: AAA_13 Location: 80491-82546 bp Feature: domain Description: AAA_13 Location: 80491-82 546 bp Feature: gene Location: 83116-83736 bp Feature: domain Description: INT_RitA_C_like Location: 83194-83722 bp Feature: domain Description: INT_RitA_C_like Location: 83194-8372 2 bp Feature: gene Location: 83938-86952 bp Feature: RT Description: RVT-UG5 Note: UG5 RT Location: 84415-84910 bp Feature: RT Description: RVT-UG5 Note: UG5 RT Location: 84415-84910 bp Feature: domain Description: nitrilase Location: 86158-86848 bp Feature: domain Description: nitrilase Location: 86158-86848 bp Feature: gene Location: 87036-89321 bp Feature: domain Description: KAP_NTPase Location: 87204-87936 bp Feature: domain Description: KAP_NTPase Location: 872 04-87936 bp Feature: gene Location: 89380-90531 bp Feature: domain Description: HTH_XRE Location: 89401-89557 bp Feature: domain Description: HTH_XRE Location: 89401-89557 bp Feature: domain Description: ImmA Location: 89815-90346 bp Feature: domain Description: ImmA Location: 89815-90346 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT AAA_13 (pfam13166), INT_RitA_C_like (cd01188), RVT-UG5, nitrilase (cl11424), KAP_NTPase (pfam07693), HTH_XRE (smart00530), ImmA (COG2856)