myRT

myRT report for GCA_000276645.1_ASM27664v1

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Seq: AKXJ01000001.1 Pseudoalteromonas sp. NJ631 Scaffold1, whole genome shotgun sequence (970668 bp)
Overview 1 RT 1: 175460-182068 bp Neighborhood of RT #1 [175460, 182433] AAA_15 RVT-Retrons TniB rve Mu-transpos_C Feature: gene Location: 175460-175735 bp Feature: gene Location: 175989-178244 bp Feature: domain Description: AAA_15 Location: 175992-176988 bp Feature: domain Description: AAA_1 5 Location: 1 75992-1 76988 bp Feature: gene Location: 178381-179499 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 178501-179107 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 1 78501 -1 791 07 bp Feature: gene Location: 179579-180592 bp Feature: domain Description: TniB Location: 179624-180158 bp Feature: domain Description: TniB Location: 1 79624-1 801 58 bp Feature: gene Location: 180595-182433 bp Feature: domain Description: rve Location: 181213-181624 bp Feature: domain Description: rve Location: 1 81 21 3-1 81 624 bp Feature: domain Description: Mu-transpos_C Location: 181888-182068 bp Feature: domain Description: Mu-transpos_C Location: 1 81 888-1 82068 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT AAA_15 (pfam13175), RVT-Retrons, TniB (pfam05621), rve (pfam00665), Mu-transpos_C (pfam09299)

Seq: AKXJ01000013.1 Pseudoalteromonas sp. NJ631 Scaffold13, whole genome shotgun sequence (131565 bp)
Overview 1 RT 1: 2717-6408 bp Neighborhood of RT #1 [2717, 6408] RVT-GII GIIM Feature: gene Location: 2717-3028 bp Feature: gene Location: 3150-3524 bp Feature: gene Location: 3612-4949 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 3891-4509 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 3891-4509 bp Feature: domain Description: GIIM Note: maturase Location: 4551-4779 bp Feature: domain Description: GIIM Note: maturase Location: 4551-4779 bp Feature: gene Location: 5147-5479 bp Feature: gene Location: 5827-6408 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, GIIM (pfam08388)