myRT

myRT report for GCA_000279655.1_ASM27965v1

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Seq: ALCE01000008.1 Streptococcus pneumoniae SPAR48 GA17530.contig.7, whole genome shotgun sequence (203087 bp)
Overview 1 RT 1: 123993-128983 bp Neighborhood of RT #1 [123993, 128983] DUF3687 MFS_MefA_like RVT-GII RVT-GII Feature: gene Location: 123993-124124 bp Feature: domain Description: DUF3687 Location: 124005-124122 bp Feature: domain Description: DUF3687 Location: 1 24005-1 241 22 bp Feature: gene Location: 124438-125616 bp Feature: domain Description: MFS_MefA_like Location: 124453-125596 bp Feature: domain Description: MFS_MefA_like Location: 1 24453-1 25596 bp Feature: gene Location: 126481-126873 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 126484-126802 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1 26484-1 26802 bp Feature: gene Location: 126915-127328 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 127119-127326 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1 271 1 9-1 27326 bp Feature: gene Location: 128045-128242 bp Feature: gene Location: 128396-128983 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT DUF3687 (pfam12459), MFS_MefA_like (cd06173), RVT-GII

Seq: ALCE01000001.1 Streptococcus pneumoniae SPAR48 GA17530.contig.0, whole genome shotgun sequence (858002 bp)
Overview 1 RT 1: 219115-224808 bp Neighborhood of RT #1 [219115, 224816] RimL Acetyltransf_10 RVT-GII RVT-GII RuvB COG3575 Feature: gene Location: 219115-219810 bp Feature: domain Description: RimL Location: 219238-219730 bp Feature: domain Description: RimL Location: 2 192 38-2 19730 bp Feature: gene Location: 219822-220238 bp Feature: domain Description: Acetyltransf_10 Location: 219900-220191 bp Feature: domain Description: Acetyltransf_10 Location: 2 19900-2 2 0191 bp Feature: gene Location: 221031-221444 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 221235-221442 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 2 2 12 35-2 2 1442 bp Feature: gene Location: 221486-221878 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 221489-221807 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 2 2 1489-2 2 1807 bp Feature: gene Location: 223265-224263 bp Feature: domain Description: RuvB Location: 223271-224258 bp Feature: domain Description: RuvB Location: 2 2 32 71-2 2 42 58 bp Feature: gene Location: 224244-224816 bp Feature: domain Description: COG3575 Location: 224259-224808 bp Feature: domain Description: COG3575 Location: 2 2 42 59-2 2 4808 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RimL (COG1670), Acetyltransf_10 (pfam13673), RVT-GII, RuvB (COG2255), COG3575 (Uncharacterized protein )