myRT

myRT report for GCA_000286475.1_SspBS35bv1.0

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Seq: ALKH01000004.1 Streptococcus sp. BS35b ctg120008231203, whole genome shotgun sequence (321264 bp)
Overview 1 RT 1: 109329-118362 bp Neighborhood of RT #1 [109329, 118385] AAA_21 AAA_21 RMtype1_S_LdeBORF1052P-TRD2-CR2 RMtype1_S_LdeBORF1052P-TRD2-CR2 RVT-Retrons COG0610 Feature: gene Location: 109329-111197 bp Ori: EJO20516.1 Feature: domain Description: AAA_21 Location: 109683-109725 bp Feature: domain Description: AAA_21 Location: 1 09683-1 09725 bp Feature: domain Description: AAA_21 Location: 109809-110310 bp Feature: domain Description: AAA_21 Location: 1 09809-1 1 031 0 bp Feature: gene Location: 111207-112457 bp Ori: EJO20731.1 Feature: domain Description: RMtype1_S_LdeBORF1052P-TRD2-CR2 Location: 111258-111813 bp Feature: domain Description: RMtype1 _S_LdeBORF1 052P-TRD2-CR2 Location: 1 1 1 258-1 1 1 81 3 bp Feature: domain Description: RMtype1_S_LdeBORF1052P-TRD2-CR2 Location: 111945-112452 bp Feature: domain Description: RMtype1 _S_LdeBORF1 052P-TRD2-CR2 Location: 1 1 1 945-1 1 2452 bp Feature: gene Location: 112438-113385 bp Ori: EJO20694.1 Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 112573-113113 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 1 1 2573-1 1 31 1 3 bp Feature: gene Location: 114113-114850 bp Feature: gene Location: 115395-118385 bp Ori: EJO20601.1 Feature: domain Description: COG0610 Location: 115413-118362 bp Feature: domain Description: COG061 0 Location: 1 1 541 3-1 1 8362 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT AAA_21 (pfam13304), RMtype1_S_LdeBORF1052P-TRD2-CR2 (cd17278), RVT-Retrons, COG0610 (Type I site-specific restriction-modification system, R (restriction) subunit and related helicases )