myRT

myRT report for GCA_000287095.2_ASM28709v2

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Seq: AJYT02000025.1 Vibrio anguillarum strain FF-93 FF-93_contig_126, whole genome shotgun sequence (46236 bp)
Overview 1 RT 1: 34204-39788 bp Neighborhood of RT #1 [34204, 39802] PRK10808 RVT-UG4 FimA PRK15285 Feature: gene Location: 34204-35262 bp Ori: OEE49807.1 Feature: domain Description: PRK10808 Location: 34207-35242 bp Feature: domain Description: PRK1 0808 Location: 34207-35242 bp Feature: gene Location: 36712-37524 bp Feature: gene Location: 37521-38480 bp Ori: OEE49809.1 Feature: RT Description: RVT-UG4 Note: UG4 RT Location: 37875-38313 bp Feature: RT Description: RVT-UG4 Note: UG4 RT Location: 37875-3831 3 bp Feature: gene Location: 38473-39048 bp Ori: OEE49810.1 Feature: domain Description: FimA Location: 38596-39046 bp Feature: domain Description: FimA Location: 38596-39046 bp Feature: gene Location: 39059-39802 bp Ori: OEE49811.1 Feature: domain Description: PRK15285 Location: 39080-39788 bp Feature: domain Description: PRK1 5285 Location: 39080-39788 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT PRK10808 (outer membrane protein A; Reviewed), RVT-UG4, FimA (pfam16970), PRK15285 (fimbrial chaperone StfD)

Seq: AJYT02000135.1 Vibrio anguillarum strain FF-93 FF-93_contig_28, whole genome shotgun sequence (27160 bp)
Overview 1 RT 1: 1015-7405 bp Neighborhood of RT #1 [1015, 7815] PRK08250 RhtB RVT_N RVT-GII Tn7_Tnp_TnsA_N Tn7_Tnp_TnsA_C rve Mu-transpos_C Feature: gene Location: 1015-1725 bp Ori: OEE42727.1 Feature: domain Description: PRK08250 Location: 1018-1711 bp Feature: domain Description: PRK082 50 Location: 1018-1711 bp Feature: gene Location: 1804-2451 bp Ori: OEE42728.1 Feature: domain Description: RhtB Location: 1831-2446 bp Feature: domain Description: RhtB Location: 1831-2 446 bp Feature: gene Location: 3116-4592 bp Feature: domain Description: RVT_N Location: 3164-3404 bp Feature: domain Description: RVT_N Location: 3164-3404 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 3452-4007 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 3452 -4007 bp Feature: gene Location: 4911-5741 bp Ori: OEE42729.1 Feature: domain Description: Tn7_Tnp_TnsA_N Location: 5136-5406 bp Feature: domain Description: Tn7_Tnp_TnsA_N Location: 5136-5406 bp Feature: domain Description: Tn7_Tnp_TnsA_C Location: 5412-5649 bp Feature: domain Description: Tn7_Tnp_TnsA_C Location: 5412 -5649 bp Feature: gene Location: 5725-7815 bp Ori: OEE42730.1 Feature: domain Description: rve Location: 6517-6937 bp Feature: domain Description: rve Location: 6517-6937 bp Feature: domain Description: Mu-transpos_C Location: 7210-7405 bp Feature: domain Description: Mu-transpos_C Location: 72 10-7405 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT PRK08250 (glutamine amidotransferase; Provisional), RhtB (COG1280), RVT_N (pfam13655), RVT-GII, Tn7_Tnp_TnsA_N (pfam08722), Tn7_Tnp_TnsA_C (pfam08721), rve (pfam00665), Mu-transpos_C (pfam09299)