myRT

myRT report for GCA_000287375.1_SMC0431A_v1

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Seq: AKZT01000073.1 Sinorhizobium meliloti C0431A contig_73, whole genome shotgun sequence (20805 bp)
Overview 1 RT 1: 82-3027 bp Neighborhood of RT #1 [82, 3041] RVT-GII GIIM MazF fabG Feature: gene Location: 82-1443 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 409-1024 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 409-1 024 bp Feature: domain Description: GIIM Note: maturase Location: 1078-1294 bp Feature: domain Description: GIIM Note: maturase Location: 1 078-1 294 bp Feature: gene Location: 1743-1946 bp Feature: domain Description: MazF Location: 1746-1857 bp Feature: domain Description: MazF Location: 1 746-1 857 bp Feature: gene Location: 2259-3041 bp Feature: domain Description: fabG Location: 2277-3027 bp Feature: domain Description: fabG Location: 2277-3027 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT MazF (COG2337), fabG (PRK12825), RVT-GII, GIIM (pfam08388)

Seq: AKZT01000074.1 Sinorhizobium meliloti C0431A contig_74, whole genome shotgun sequence (28063 bp)
Overview 1 RT 1: 82-4414 bp Neighborhood of RT #1 [82, 4425] RVT-GII GIIM PRK09356 hutH Feature: gene Location: 82-1443 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 409-1024 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 409-102 4 bp Feature: domain Description: GIIM Note: maturase Location: 1078-1294 bp Feature: domain Description: GIIM Note: maturase Location: 1078-12 94 bp Feature: gene Location: 1523-2893 bp Feature: domain Description: PRK09356 Location: 1682-2885 bp Feature: domain Description: PRK09356 Location: 1682 -2 885 bp Feature: gene Location: 2890-4425 bp Feature: domain Description: hutH Location: 2899-4414 bp Feature: domain Description: hutH Location: 2 899-4414 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT PRK09356 (imidazolonepropionase; Validated), hutH (TIGR01225), RVT-GII, GIIM (pfam08388)

Seq: AKZT01000076.1 Sinorhizobium meliloti C0431A contig_76, whole genome shotgun sequence (3399 bp)
Overview 1 RT 1: 89-3156 bp Neighborhood of RT #1 [89, 3272] RVT-GII GIIM AraJ HTH_ARSR Feature: gene Location: 89-1450 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 416-1031 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 416-103 1 bp Feature: domain Description: GIIM Note: maturase Location: 1085-1301 bp Feature: domain Description: GIIM Note: maturase Location: 1085-13 01 bp Feature: gene Location: 1627-2811 bp Feature: domain Description: AraJ Location: 1630-2788 bp Feature: domain Description: AraJ Location: 163 0-2788 bp Feature: gene Location: 2901-3272 bp Feature: domain Description: HTH_ARSR Location: 2958-3156 bp Feature: domain Description: HTH_ARSR Location: 2958-3 156 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT AraJ (COG2814), HTH_ARSR (smart00418), RVT-GII, GIIM (pfam08388)

Seq: AKZT01000131.1 Sinorhizobium meliloti C0431A contig_131, whole genome shotgun sequence (44621 bp)
Overview 1 RT 1: 42093-44384 bp Neighborhood of RT #1 [42093, 44533] RVT-GII GIIM Feature: gene Location: 42093-42395 bp Feature: gene Location: 42731-42970 bp Feature: gene Location: 43172-44533 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 43499-44114 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 4 34 99-4 4 114 bp Feature: domain Description: GIIM Note: maturase Location: 44168-44384 bp Feature: domain Description: GIIM Note: maturase Location: 4 4 168-4 4 384 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, GIIM (pfam08388)