myRT

myRT report for GCA_000287475.1_SMH1_v1

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Seq: AKZR01000016.1 Sinorhizobium meliloti H1 contig_16, whole genome shotgun sequence (1756 bp)
Overview 1 RT 1: 2-1643 bp Neighborhood of RT #1 [2, 1675] RVT-GII DDE_Tnp_IS66 DDE_Tnp_IS66_C Feature: gene Location: 2-1321 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 740-1322 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 740-1 322 bp Feature: gene Location: 1421-1675 bp Feature: domain Description: DDE_Tnp_IS66 Location: 1424-1520 bp Feature: domain Description: DDE_Tnp_IS66 Location: 1 424-1 520 bp Feature: domain Description: DDE_Tnp_IS66_C Location: 1538-1643 bp Feature: domain Description: DDE_Tnp_IS66_C Location: 1 538-1 643 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT DDE_Tnp_IS66 (pfam03050), DDE_Tnp_IS66_C (pfam13817), RVT-GII

Seq: AKZR01000189.1 Sinorhizobium meliloti H1 contig_189, whole genome shotgun sequence (3470 bp)
Overview 1 RT 1: 1003-3470 bp Neighborhood of RT #1 [1003, 3469] LZ_Tnp_IS66 zf-IS66 DDE_Tnp_IS66 TnpB_IS66 RVT-GII Feature: gene Location: 1003-2406 bp Feature: domain Description: LZ_Tnp_IS66 Location: 1084-1315 bp Feature: domain Description: LZ_Tnp_IS66 Location: 1084-1315 bp Feature: domain Description: zf-IS66 Location: 1342-1468 bp Feature: domain Description: zf-IS66 Location: 1342 -1468 bp Feature: domain Description: DDE_Tnp_IS66 Location: 1531-1981 bp Feature: domain Description: DDE_Tnp_IS66 Location: 1531-1981 bp Feature: gene Location: 2439-2840 bp Feature: domain Description: TnpB_IS66 Location: 2466-2751 bp Feature: domain Description: TnpB_IS66 Location: 2 466-2 751 bp Feature: gene Location: 2945-3469 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 2948-3470 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 2 948-3470 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT LZ_Tnp_IS66 (pfam13007), zf-IS66 (pfam13005), DDE_Tnp_IS66 (pfam03050), TnpB_IS66 (pfam05717), RVT-GII