myRT

myRT report for GCA_000287535.1_SMAK11_v1

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Seq: AKZV01000171.1 Sinorhizobium meliloti AK11 contig_171, whole genome shotgun sequence (5200 bp)
Overview 1 RT 1: 2205-5191 bp Neighborhood of RT #1 [2205, 5191] acpP RVT-GII Feature: gene Location: 2205-2414 bp Feature: gene Location: 2714-2965 bp Feature: domain Description: acpP Location: 2735-2957 bp Feature: domain Description: acpP Location: 2735-2957 bp Feature: gene Location: 3388-4695 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 3640-4327 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 3640-4327 bp Feature: gene Location: 4931-5191 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT acpP (PRK00982), RVT-GII

Seq: AKZV01000183.1 Sinorhizobium meliloti AK11 contig_183, whole genome shotgun sequence (7005 bp)
Overview 1 RT 1: 4183-6996 bp Neighborhood of RT #1 [4183, 6996] HTH_Tnp_1 RVT-GII Feature: gene Location: 4183-4398 bp Feature: gene Location: 4656-4805 bp Feature: domain Description: HTH_Tnp_1 Location: 4680-4791 bp Feature: domain Description: HTH_Tnp_1 Location: 4680-4791 bp Feature: gene Location: 5193-6500 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 5445-6132 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 5445-6132 bp Feature: gene Location: 6736-6996 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT HTH_Tnp_1 (pfam01527), RVT-GII

Seq: AKZV01000198.1 Sinorhizobium meliloti AK11 contig_198, whole genome shotgun sequence (2175 bp)
Overview 1 RT 1: 1-2166 bp Neighborhood of RT #1 [1, 2166] RVT-GII Feature: gene Location: 1-135 bp Feature: gene Location: 363-1670 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 615-1302 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 615-13 02 bp Feature: gene Location: 1906-2166 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII

Seq: AKZV01000416.1 Sinorhizobium meliloti AK11 contig_416, whole genome shotgun sequence (11823 bp)
Overview 1 RT 1: 2719-8820 bp Neighborhood of RT #1 [2719, 8831] HTH_ARSR AraJ RVT-GII RVT-GII group_II_RT_mat PRK09356 hutH Feature: gene Location: 2719-3090 bp Feature: domain Description: HTH_ARSR Location: 2776-2974 bp Feature: domain Description: HTH_ARSR Location: 2776-2974 bp Feature: gene Location: 3180-4355 bp Feature: domain Description: AraJ Location: 3183-4332 bp Feature: domain Description: AraJ Location: 3183-4 332 bp Feature: gene Location: 4532-5110 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 4859-5081 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 4 859-5081 bp Feature: gene Location: 5185-5850 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 5188-5473 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 5188-54 73 bp Feature: domain Description: group_II_RT_mat Note: maturase Location: 5512-5677 bp Feature: domain Description: group_II_RT_mat Note: maturase Location: 5512-5677 bp Feature: gene Location: 5929-7299 bp Feature: domain Description: PRK09356 Location: 6088-7291 bp Feature: domain Description: PRK09356 Location: 6088-7291 bp Feature: gene Location: 7296-8831 bp Feature: domain Description: hutH Location: 7305-8820 bp Feature: domain Description: hutH Location: 7305-8820 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT HTH_ARSR (smart00418), AraJ (COG2814), RVT-GII, group_II_RT_mat (TIGR04416), PRK09356 (imidazolonepropionase; Validated), hutH (TIGR01225)