myRT

myRT report for GCA_000289415.1_ASM28941v1

Download annotations/find similar RTs

Seq: ALSF01000077.1 Streptococcus agalactiae MRI Z1-216 ctg7180000002342, whole genome shotgun sequence (62347 bp)
Overview 1 RT 1: 57564-62119 bp Neighborhood of RT #1 [57564, 62307] PRK11856 lipoamide_DH lipoyltrans RVT-GII GIIM Feature: gene Location: 57564-59321 bp Feature: domain Description: PRK11856 Location: 57567-57915 bp Feature: domain Description: PRK1 1 856 Location: 57567-5791 5 bp Feature: domain Description: lipoamide_DH Location: 57942-59301 bp Feature: domain Description: lipoamide_DH Location: 57942-59301 bp Feature: gene Location: 59419-60408 bp Feature: domain Description: lipoyltrans Location: 59434-60382 bp Feature: domain Description: lipoyltrans Location: 59434-60382 bp Feature: gene Location: 61030-62307 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 61234-61849 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 61 234-61 849 bp Feature: domain Description: GIIM Note: maturase Location: 61903-62119 bp Feature: domain Description: GIIM Note: maturase Location: 61 903-621 1 9 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT PRK11856 (branched-chain alpha-keto acid dehydrogenase subunit E2; Reviewed), lipoamide_DH (TIGR01350), lipoyltrans (TIGR00545), RVT-GII, GIIM (pfam08388)

Seq: ALSF01000032.1 Streptococcus agalactiae MRI Z1-216 ctg7180000002297, whole genome shotgun sequence (75230 bp)
Overview 1 RT 1: 71929-74798 bp Neighborhood of RT #1 [71929, 74986] YraQ YcgQ RVT-GII GIIM Feature: gene Location: 71929-72831 bp Feature: domain Description: YraQ Location: 71932-72829 bp Feature: domain Description: YraQ Location: 71932 -72 82 9 bp Feature: gene Location: 72831-73643 bp Feature: domain Description: YcgQ Location: 72834-73641 bp Feature: domain Description: YcgQ Location: 72 834-73641 bp Feature: gene Location: 73709-74986 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 73913-74528 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 73913-7452 8 bp Feature: domain Description: GIIM Note: maturase Location: 74582-74798 bp Feature: domain Description: GIIM Note: maturase Location: 74582 -74798 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT YraQ (COG0701), YcgQ (COG3689), RVT-GII, GIIM (pfam08388)

Seq: ALSF01000070.1 Streptococcus agalactiae MRI Z1-216 ctg7180000002335, whole genome shotgun sequence (50034 bp)
Overview 1 RT 1: 45732-49806 bp Neighborhood of RT #1 [45732, 49994] Cof PRK10416 RVT-GII GIIM Feature: gene Location: 45732-46556 bp Feature: domain Description: Cof Location: 45741-46542 bp Feature: domain Description: Cof Location: 45741-46542 bp Feature: gene Location: 46556-48166 bp Feature: domain Description: PRK10416 Location: 46880-48155 bp Feature: domain Description: PRK10416 Location: 46880-48155 bp Feature: gene Location: 48717-49994 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 48921-49536 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 48921-4953 6 bp Feature: domain Description: GIIM Note: maturase Location: 49590-49806 bp Feature: domain Description: GIIM Note: maturase Location: 49590-49806 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT Cof (COG0561), PRK10416 (signal recognition particle-docking protein FtsY; Provisional), RVT-GII, GIIM (pfam08388)

Seq: ALSF01000067.1 Streptococcus agalactiae MRI Z1-216 ctg7180000002332, whole genome shotgun sequence (10919 bp)
Overview 1 RT 1: 6129-10691 bp Neighborhood of RT #1 [6129, 10879] PBP2_GlnP PBP2_GlnP HisM GlnQ RVT-GII GIIM Feature: gene Location: 6129-8312 bp Feature: domain Description: PBP2_GlnP Location: 6213-6867 bp Feature: domain Description: PBP2_GlnP Location: 6213-6867 bp Feature: domain Description: PBP2_GlnP Location: 6945-7596 bp Feature: domain Description: PBP2_GlnP Location: 694 5-7596 bp Feature: domain Description: HisM Location: 7665-8310 bp Feature: domain Description: HisM Location: 7665-8310 bp Feature: gene Location: 8312-9052 bp Feature: domain Description: GlnQ Location: 8330-9041 bp Feature: domain Description: GlnQ Location: 8330-904 1 bp Feature: gene Location: 9602-10879 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 9806-10421 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 9806-104 21 bp Feature: domain Description: GIIM Note: maturase Location: 10475-10691 bp Feature: domain Description: GIIM Note: maturase Location: 104 75-10691 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT PBP2_GlnP (cd13619), HisM (COG0765), GlnQ (COG1126), RVT-GII, GIIM (pfam08388)

Seq: ALSF01000050.1 Streptococcus agalactiae MRI Z1-216 ctg7180000002315, whole genome shotgun sequence (71108 bp)
Overview 1 RT 1: 68077-70667 bp Neighborhood of RT #1 [68077, 70864] PhoE PRK08295 RVT-GII GIIM Feature: gene Location: 68077-68769 bp Feature: domain Description: PhoE Location: 68086-68746 bp Feature: domain Description: PhoE Location: 68086-68746 bp Feature: gene Location: 68892-69371 bp Feature: domain Description: PRK08295 Location: 68907-69132 bp Feature: domain Description: PRK08295 Location: 68907-69132 bp Feature: gene Location: 69587-70864 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 69791-70406 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 69791-70406 bp Feature: domain Description: GIIM Note: maturase Location: 70460-70667 bp Feature: domain Description: GIIM Note: maturase Location: 70460-70667 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT PhoE (COG0406), PRK08295 (RNA polymerase sporulation sigma factor SigH), RVT-GII, GIIM (pfam08388)

Seq: ALSF01000049.1 Streptococcus agalactiae MRI Z1-216 ctg7180000002314, whole genome shotgun sequence (31549 bp)
Overview 1 RT 1: 8599-18097 bp Neighborhood of RT #1 [8599, 18126] RVT_N RVT-GII GIIM N6_Mtase COG4646 KOG0390 Feature: gene Location: 8599-8898 bp Feature: gene Location: 8969-9778 bp Feature: gene Location: 9912-11570 bp Feature: RT Description: RVT_N Location: 9957-10200 bp Feature: RT Description: RVT_N Location: 9957-10200 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 10245-10893 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 10245-10893 bp Feature: domain Description: GIIM Note: maturase Location: 10950-11178 bp Feature: domain Description: GIIM Note: maturase Location: 10950-11178 bp Feature: gene Location: 11567-11677 bp Feature: gene Location: 12130-18126 bp Feature: domain Description: N6_Mtase Location: 14143-14734 bp Feature: domain Description: N6 _Mtase Location: 14143-14734 bp Feature: domain Description: COG4646 Location: 15325-17629 bp Feature: domain Description: COG46 46 Location: 15325-176 29 bp Feature: domain Description: KOG0390 Location: 17899-18097 bp Feature: domain Description: KOG0390 Location: 17899-18097 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT N6_Mtase (pfam02384), COG4646 (Adenine-specific DNA methylase, N12 class ), KOG0390 (KOG0390, DNA repair protein, SNF2 family ), RVT_N (pfam13655), RVT-GII, GIIM (pfam08388)

Seq: ALSF01000085.1 Streptococcus agalactiae MRI Z1-216 ctg7180000002350, whole genome shotgun sequence (17862 bp)
Overview 1 RT 1: 41-5961 bp Neighborhood of RT #1 [41, 6032] RVT-GII GIIM PLN02563 MFS_MucK Feature: gene Location: 41-1318 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 245-860 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 245-860 bp Feature: domain Description: GIIM Note: maturase Location: 914-1130 bp Feature: domain Description: GIIM Note: maturase Location: 914-1130 bp Feature: gene Location: 1907-4408 bp Feature: domain Description: PLN02563 Location: 1916-4406 bp Feature: domain Description: PLN02563 Location: 1916-4406 bp Feature: gene Location: 4785-6032 bp Feature: domain Description: MFS_MucK Location: 4830-5961 bp Feature: domain Description: MFS_MucK Location: 4830-5961 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT PLN02563 (aminoacyl-tRNA ligase), RVT-GII, GIIM (pfam08388)

Seq: ALSF01000040.1 Streptococcus agalactiae MRI Z1-216 ctg7180000002305, whole genome shotgun sequence (3389 bp)
Overview 1 RT 1: 245-3297 bp Neighborhood of RT #1 [245, 3314] RVT-GII GIIM BaeS Feature: gene Location: 245-1522 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 449-1064 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 449-1064 bp Feature: domain Description: GIIM Note: maturase Location: 1118-1334 bp Feature: domain Description: GIIM Note: maturase Location: 1118 -1334 bp Feature: gene Location: 1600-2208 bp Feature: gene Location: 2301-3314 bp Feature: domain Description: BaeS Location: 2457-3297 bp Feature: domain Description: BaeS Location: 2457-3297 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT BaeS (COG0642), RVT-GII, GIIM (pfam08388)