myRT

myRT report for GCA_000290695.1_Baci_cere_VDM022_V1

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Seq: JH791839.1 Bacillus mycoides strain VDM022 genomic scaffold supercont1.3, whole genome shotgun sequence (369153 bp)
Overview 1 RT 1: 315741-319959 bp Neighborhood of RT #1 [315741, 319976] CwlT_like RVT-GII HNHc CwlT_like Spr Feature: gene Location: 315741-316030 bp Feature: gene Location: 316058-316696 bp Ori: EJR96775.1 Feature: domain Description: CwlT_like Location: 316433-316679 bp Feature: domain Description: CwlT_like Location: 31 6433-31 6679 bp Feature: gene Location: 317489-318631 bp Ori: EJR96776.1 Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 317726-318431 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 31 7726-31 8431 bp Feature: gene Location: 318915-319250 bp Ori: EJR96777.1 Feature: domain Description: HNHc Note: nucleases Location: 318975-319101 bp Feature: domain Description: HNHc Note: nucleases Location: 31 8975-31 91 01 bp Feature: gene Location: 319284-319976 bp Ori: EJR96778.1 Feature: domain Description: CwlT_like Location: 319362-319551 bp Feature: domain Description: CwlT_like Location: 31 9362-31 9551 bp Feature: domain Description: Spr Location: 319587-319959 bp Feature: domain Description: Spr Location: 31 9587-31 9959 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT CwlT_like, RVT-GII, HNHc (smart00507), Spr (COG0791)

Seq: JH791843.1 Bacillus mycoides strain VDM022 genomic scaffold supercont1.7, whole genome shotgun sequence (154262 bp)
Overview 1 RT 1: 69674-76498 bp Neighborhood of RT #1 [69674, 76617] Endotoxin_N Endotoxin_N delta_endotoxin_C Endotoxin_C2 Cry1Ac_D5 Endotoxin_C2 RVT_N RVT-GII DDE_Tnp_IS66 Feature: gene Location: 69674-70303 bp Feature: gene Location: 70409-74740 bp Ori: EJR93120.1 Feature: domain Description: Endotoxin_N Location: 70811-71351 bp Feature: domain Description: Endotoxin_N Location: 70811-71351 bp Feature: domain Description: Endotoxin_N Location: 71513-71618 bp Feature: domain Description: Endotoxin_N Location: 71513-71618 bp Feature: domain Description: delta_endotoxin_C Location: 71642-72728 bp Feature: domain Description: delta_endotoxin_C Location: 71642 -72 72 8 bp Feature: domain Description: Endotoxin_C2 Location: 72758-72944 bp Feature: domain Description: Endotoxin_C2 Location: 72 758-72 944 bp Feature: domain Description: Cry1Ac_D5 Location: 72965-73550 bp Feature: domain Description: Cry1Ac_D5 Location: 72 965-73550 bp Feature: domain Description: Endotoxin_C2 Location: 73655-73769 bp Feature: domain Description: Endotoxin_C2 Location: 73655-73769 bp Feature: gene Location: 74888-75700 bp Ori: EJR93121.1 Feature: domain Description: RVT_N Location: 74936-75179 bp Feature: domain Description: RVT_N Location: 74936-75179 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 75236-75686 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 752 36-75686 bp Feature: gene Location: 76234-76617 bp Ori: EJR93122.1 Feature: domain Description: DDE_Tnp_IS66 Location: 76267-76498 bp Feature: domain Description: DDE_Tnp_IS66 Location: 762 67-76498 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT Endotoxin_N (pfam03945), delta_endotoxin_C (cd04085), Endotoxin_C2 (pfam18449), Cry1Ac_D5 (pfam17997), RVT_N (pfam13655), RVT-GII, DDE_Tnp_IS66 (pfam03050)

Seq: JH791838.1 Bacillus mycoides strain VDM022 genomic scaffold supercont1.2, whole genome shotgun sequence (452864 bp)
Overview 1 RT 1: 237818-244315 bp Neighborhood of RT #1 [237818, 244315] Peptidase_S78 major_cap_HK97 RVT-UG3 RVT-UG8 Feature: gene Location: 237818-239356 bp Ori: EJR98186.1 Feature: domain Description: Peptidase_S78 Location: 237854-238322 bp Feature: domain Description: Peptidase_S78 Location: 23 7854-23 83 22 bp Feature: domain Description: major_cap_HK97 Location: 238376-239348 bp Feature: domain Description: major_cap_HK97 Location: 23 83 76-23 93 48 bp Feature: gene Location: 239462-239662 bp Feature: gene Location: 240010-241263 bp Ori: EJR98188.1 Feature: RT Description: RVT-UG3 Note: UG3 RT Location: 240262-240715 bp Feature: RT Description: RVT-UG3 Note: UG3 RT Location: 240262-240715 bp Feature: gene Location: 241370-243373 bp Ori: EJR98189.1 Feature: RT Description: RVT-UG8 Note: UG8 RT Location: 241877-242321 bp Feature: RT Description: RVT-UG8 Note: UG8 RT Location: 241877-2423 21 bp Feature: gene Location: 243607-243783 bp Feature: gene Location: 243917-244315 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT Peptidase_S78 (pfam04586), major_cap_HK97 (TIGR01554), RVT-UG3, RVT-UG8