myRT

myRT report for GCA_000290735.1_Baci_cere_VD169_V1

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Seq: JH791834.1 Bacillus cereus VD169 genomic scaffold supercont1.2, whole genome shotgun sequence (485173 bp)
Overview 1 RT 1: 270080-273817 bp Neighborhood of RT #1 [270080, 273957] INT_ICEBs1_C_like Arm-DNA-bind_4 RVT-Retrons TIR_2 Feature: gene Location: 270080-270568 bp Feature: domain Description: INT_ICEBs1_C_like Location: 270266-270566 bp Feature: domain Description: INT_ICEBs1 _C_like Location: 270266-270566 bp Feature: gene Location: 270727-270882 bp Feature: domain Description: Arm-DNA-bind_4 Location: 270769-270877 bp Feature: domain Description: Arm-DNA-bind_4 Location: 270769-270877 bp Feature: gene Location: 271142-272155 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 271277-271832 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 271 277-271 832 bp Feature: gene Location: 272136-272414 bp Feature: gene Location: 273163-273957 bp Feature: domain Description: TIR_2 Location: 273535-273817 bp Feature: domain Description: TIR_2 Location: 273535-27381 7 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT INT_ICEBs1_C_like (cd01189), Arm-DNA-bind_4 (pfam14657), RVT-Retrons, TIR_2 (pfam13676)

Seq: JH791835.1 Bacillus cereus VD169 genomic scaffold supercont1.3, whole genome shotgun sequence (215265 bp)
Overview 1 RT 1: 108860-115738 bp Neighborhood of RT #1 [108860, 115738] SF2_C_SNF RVT-GII Intron_maturas2 HNHc DEXDc Feature: gene Location: 108860-109573 bp Feature: gene Location: 109590-111092 bp Feature: domain Description: SF2_C_SNF Location: 110241-110484 bp Feature: domain Description: SF2 _C_SNF Location: 1102 41-110484 bp Feature: gene Location: 111247-113082 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 111514-112345 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 111514-112 345 bp Feature: domain Description: Intron_maturas2 Location: 112414-112789 bp Feature: domain Description: Intron_maturas2 Location: 112 414-112 789 bp Feature: domain Description: HNHc Note: nucleases Location: 112882-113029 bp Feature: domain Description: HNHc Note: nucleases Location: 112 882 -11302 9 bp Feature: gene Location: 113685-115439 bp Feature: domain Description: DEXDc Location: 114462-115416 bp Feature: domain Description: DEXDc Location: 114462 -115416 bp Feature: gene Location: 115511-115738 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT SF2_C_SNF (cd18793), RVT-GII, Intron_maturas2 (pfam01348), HNHc (smart00507), DEXDc (smart00487)