myRT

myRT report for GCA_000290775.1_Baci_cere_VD156_V1

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Seq: JH791865.1 Bacillus cereus VD156 genomic scaffold supercont1.1, whole genome shotgun sequence (4398547 bp)
Overview 1 RT 1: 737709-743228 bp Neighborhood of RT #1 [737709, 743278] DedA T_den_put_tspse RVT_N RVT-GII GIIM HNHc PDDEXK_2 DUF2199 Feature: gene Location: 737709-738308 bp Ori: EJR86983.1 Feature: domain Description: DedA Location: 737718-738288 bp Feature: domain Description: DedA Location: 73771 8-738288 bp Feature: gene Location: 739068-739658 bp Ori: EJR86984.1 Feature: domain Description: T_den_put_tspse Location: 739089-739644 bp Feature: domain Description: T_den_put_tspse Location: 739089-739644 bp Feature: gene Location: 739864-741690 bp Ori: EJR86985.1 Feature: domain Description: RVT_N Location: 739912-740155 bp Feature: domain Description: RVT_N Location: 73991 2-7401 55 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 740212-740881 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 74021 2-740881 bp Feature: domain Description: GIIM Note: maturase Location: 740941-741175 bp Feature: domain Description: GIIM Note: maturase Location: 740941 -741 1 75 bp Feature: domain Description: HNHc Note: nucleases Location: 741373-741541 bp Feature: domain Description: HNHc Note: nucleases Location: 741 373-741 541 bp Feature: gene Location: 742266-742538 bp Ori: EJR86986.1 Feature: domain Description: PDDEXK_2 Location: 742296-742527 bp Feature: domain Description: PDDEXK_2 Location: 742296-742527 bp Feature: gene Location: 742769-743278 bp Ori: EJR86987.1 Feature: domain Description: DUF2199 Location: 742826-743228 bp Feature: domain Description: DUF21 99 Location: 742826-743228 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT DedA (COG0586), T_den_put_tspse (TIGR01784), RVT_N (pfam13655), RVT-GII, GIIM (pfam08388), HNHc (smart00507), PDDEXK_2 (pfam12784), DUF2199 (pfam09965)

Seq: JH791868.1 Bacillus cereus VD156 genomic scaffold supercont1.4, whole genome shotgun sequence (287716 bp)
Overview 1 RT 1: 26231-30005 bp 2 RT 2: 114669-123643 bp Neighborhood of RT #1 [26231, 30016] T_den_put_tspse RVT_N RVT-GII GIIM HNHc PDDEXK_2 Neighborhood of RT #2 [114669, 124308] rpsA RVT-GII MPH2' TraG-D_C Ftsk_gamma Ftsk_gamma Feature: gene Location: 26231-26464 bp Feature: gene Location: 26645-27136 bp Ori: EJR72302.1 Feature: domain Description: T_den_put_tspse Location: 26648-27125 bp Feature: domain Description: T_den_put_tspse Location: 2 6648-2 712 5 bp Feature: gene Location: 27342-29168 bp Ori: EJR72303.1 Feature: domain Description: RVT_N Location: 27390-27633 bp Feature: domain Description: RVT_N Location: 2 7390-2 7633 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 27690-28359 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 2 7690-2 8359 bp Feature: domain Description: GIIM Note: maturase Location: 28419-28653 bp Feature: domain Description: GIIM Note: maturase Location: 2 8419-2 8653 bp Feature: domain Description: HNHc Note: nucleases Location: 28851-29019 bp Feature: domain Description: HNHc Note: nucleases Location: 2 8851-2 9019 bp Feature: gene Location: 29744-30016 bp Ori: EJR72304.1 Feature: domain Description: PDDEXK_2 Location: 29774-30005 bp Feature: domain Description: PDDEXK_2 Location: 2 9774-30005 bp Feature: gene Location: 114669-115595 bp Feature: gene Location: 115605-116618 bp Ori: EJR71703.1 Feature: domain Description: rpsA Location: 115902-116439 bp Feature: domain Description: rpsA Location: 115902 -116439 bp Feature: gene Location: 116673-118694 bp Ori: EJR71704.1 Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 116994-117729 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 116994-11772 9 bp Feature: gene Location: 119779-120678 bp Ori: EJR71705.1 Feature: domain Description: MPH2' Location: 119803-120622 bp Feature: domain Description: MPH2 ' Location: 119803-12 062 2 bp Feature: gene Location: 120808-124308 bp Ori: EJR71706.1 Feature: domain Description: TraG-D_C Location: 122425-122782 bp Feature: domain Description: TraG-D_C Location: 12 2 42 5-12 2 782 bp Feature: domain Description: Ftsk_gamma Location: 123190-123370 bp Feature: domain Description: Ftsk_gamma Location: 12 3190-12 3370 bp Feature: domain Description: Ftsk_gamma Location: 123502-123643 bp Feature: domain Description: Ftsk_gamma Location: 12 3502 -12 3643 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT T_den_put_tspse (TIGR01784), RVT_N (pfam13655), RVT-GII, GIIM (pfam08388), HNHc (smart00507), PDDEXK_2 (pfam12784), rpsA (TIGR00717), MPH2' (cd05152), TraG-D_C (pfam12696), Ftsk_gamma (smart00843)

Seq: JH791867.1 Bacillus cereus VD156 genomic scaffold supercont1.3, whole genome shotgun sequence (509363 bp)
Overview 1 RT 1: 200540-214860 bp Neighborhood of RT #1 [200540, 214860] RVT-GII KOG4768 RVT-GII HNHc RVT-GII Intron_maturas2 HNHc RVT-GII RVT-GII GIIM HNHc TraG-D_C Ftsk_gamma Ftsk_gamma Feature: gene Location: 200540-200926 bp Feature: gene Location: 200944-202095 bp Feature: gene Location: 202900-203757 bp Ori: EJR74310.1 Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 202966-203746 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 202966-203 746 bp Feature: gene Location: 203754-204506 bp Ori: EJR74311.1 Feature: domain Description: KOG4768 Location: 203763-204501 bp Feature: domain Description: KOG4768 Location: 203 763 -204501 bp Feature: gene Location: 205473-207263 bp Ori: EJR74312.1 Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 205770-206466 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 205770-206466 bp Feature: domain Description: HNHc Note: nucleases Location: 207006-207138 bp Feature: domain Description: HNHc Note: nucleases Location: 207006-20713 8 bp Feature: gene Location: 207329-207598 bp Feature: gene Location: 208190-210007 bp Ori: EJR74314.1 Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 208460-209285 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 208460-209285 bp Feature: domain Description: Intron_maturas2 Location: 209366-209657 bp Feature: domain Description: Intron_maturas2 Location: 2093 66-209657 bp Feature: domain Description: HNHc Note: nucleases Location: 209804-209981 bp Feature: domain Description: HNHc Note: nucleases Location: 209804-209981 bp Feature: gene Location: 210988-211146 bp Feature: gene Location: 211330-211719 bp Ori: EJR74316.1 Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 211333-211717 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 2113 3 3 -211717 bp Feature: gene Location: 211720-212862 bp Ori: EJR74317.1 Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 211738-211993 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 21173 8-211993 bp Feature: domain Description: GIIM Note: maturase Location: 212083-212275 bp Feature: domain Description: GIIM Note: maturase Location: 212083 -212275 bp Feature: domain Description: HNHc Note: nucleases Location: 212623-212788 bp Feature: domain Description: HNHc Note: nucleases Location: 212623 -212788 bp Feature: gene Location: 213095-214381 bp Ori: EJR74318.1 Feature: domain Description: TraG-D_C Location: 213107-213425 bp Feature: domain Description: TraG-D_C Location: 213 107-213 425 bp Feature: domain Description: Ftsk_gamma Location: 213851-214031 bp Feature: domain Description: Ftsk_gamma Location: 213 851-21403 1 bp Feature: domain Description: Ftsk_gamma Location: 214184-214358 bp Feature: domain Description: Ftsk_gamma Location: 214184-2143 58 bp Feature: gene Location: 214372-214860 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, KOG4768 (KOG4768, Mitochondrial mRNA maturase ), HNHc (smart00507), Intron_maturas2 (pfam01348), GIIM (pfam08388), TraG-D_C (pfam12696), Ftsk_gamma (smart00843)