myRT

myRT report for GCA_000290795.1_Baci_cere_VD154_V1

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Seq: JH791885.1 Bacillus cereus VD154 genomic scaffold supercont1.6, whole genome shotgun sequence (250625 bp)
Overview 1 RT 1: 4829-11004 bp Neighborhood of RT #1 [4829, 11004] T4SS-DNA_transf RVT-GII HNHc T4SS-DNA_transf Feature: gene Location: 4829-5734 bp Feature: gene Location: 5737-6918 bp Feature: domain Description: T4SS-DNA_transf Location: 5743-6310 bp Feature: domain Description: T4SS-DNA_transf Location: 5743-631 0 bp Feature: gene Location: 7641-9470 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 7941-8643 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 7941 -8643 bp Feature: domain Description: HNHc Note: nucleases Location: 9228-9354 bp Feature: domain Description: HNHc Note: nucleases Location: 9228-9354 bp Feature: gene Location: 10192-10413 bp Feature: domain Description: T4SS-DNA_transf Location: 10225-10396 bp Feature: domain Description: T4SS-DNA_transf Location: 1 0225-1 0396 bp Feature: gene Location: 10514-11004 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT T4SS-DNA_transf (pfam02534), RVT-GII, HNHc (smart00507)

Seq: JH791880.1 Bacillus cereus VD154 genomic scaffold supercont1.1, whole genome shotgun sequence (1922107 bp)
Overview 1 RT 1: 1419519-1423991 bp Neighborhood of RT #1 [1419519, 1424035] TSC22 RimL RVT-GII Intron_maturas2 HNHc FeuA Feature: gene Location: 1419519-1419746 bp Feature: domain Description: TSC22 Location: 1419546-1419639 bp Feature: domain Description: TSC2 2 Location: 1419546-1419639 bp Feature: gene Location: 1419846-1420352 bp Feature: domain Description: RimL Location: 1419984-1420338 bp Feature: domain Description: RimL Location: 1419984-142 0338 bp Feature: gene Location: 1420420-1422234 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1420684-1421515 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 142 0684-142 1515 bp Feature: domain Description: Intron_maturas2 Location: 1421596-1421983 bp Feature: domain Description: Intron_maturas2 Location: 142 1596-142 1983 bp Feature: domain Description: HNHc Note: nucleases Location: 1422064-1422205 bp Feature: domain Description: HNHc Note: nucleases Location: 142 2 064-142 2 2 05 bp Feature: gene Location: 1422817-1422909 bp Feature: gene Location: 1423127-1424035 bp Feature: domain Description: FeuA Location: 1423220-1423991 bp Feature: domain Description: FeuA Location: 142 32 2 0-142 3991 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT TSC22 (pfam01166), RimL (COG1670), RVT-GII, Intron_maturas2 (pfam01348), HNHc (smart00507), FeuA (cd01138)

Seq: JH791882.1 Bacillus cereus VD154 genomic scaffold supercont1.3, whole genome shotgun sequence (1294199 bp)
Overview 1 RT 1: 96606-100901 bp Neighborhood of RT #1 [96606, 100954] ComJ RVT-GII Intron_maturas2 HNHc HTH_MlrA-like_sg1 DUF3967 Feature: gene Location: 96606-96995 bp Feature: domain Description: ComJ Location: 96612-96984 bp Feature: domain Description: ComJ Location: 96612-96984 bp Feature: gene Location: 97032-97196 bp Feature: gene Location: 97264-99078 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 97528-98359 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 97528-983 59 bp Feature: domain Description: Intron_maturas2 Location: 98440-98827 bp Feature: domain Description: Intron_maturas2 Location: 98440-98827 bp Feature: domain Description: HNHc Note: nucleases Location: 98908-99049 bp Feature: domain Description: HNHc Note: nucleases Location: 98908-99049 bp Feature: gene Location: 99661-99978 bp Feature: gene Location: 100205-100954 bp Feature: domain Description: HTH_MlrA-like_sg1 Location: 100220-100376 bp Feature: domain Description: HTH_MlrA-like_sg1 Location: 100220-1003 76 bp Feature: domain Description: DUF3967 Location: 100808-100901 bp Feature: domain Description: DUF3 967 Location: 100808-100901 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT HTH_MlrA-like_sg1 (cd04764), DUF3967 (pfam13152), ComJ (pfam11033), RVT-GII, Intron_maturas2 (pfam01348), HNHc (smart00507)

Seq: JH791881.1 Bacillus cereus VD154 genomic scaffold supercont1.2, whole genome shotgun sequence (1513461 bp)
Overview 1 RT 1: 1508617-1513193 bp Neighborhood of RT #1 [1508617, 1513193] PGRP SH3b CwlA RVT-GII HNHc Feature: gene Location: 1508617-1508763 bp Feature: gene Location: 1508887-1509939 bp Feature: domain Description: PGRP Location: 1509022-1509382 bp Feature: domain Description: PGRP Location: 1509022-1509382 bp Feature: domain Description: SH3b Location: 1509526-1509682 bp Feature: domain Description: SH3b Location: 1509526-1509682 bp Feature: domain Description: CwlA Location: 1509685-1509928 bp Feature: domain Description: CwlA Location: 1509685-1509928 bp Feature: gene Location: 1510152-1511771 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1510257-1510956 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1510257-1510956 bp Feature: domain Description: HNHc Note: nucleases Location: 1511523-1511646 bp Feature: domain Description: HNHc Note: nucleases Location: 1511523-151164 6 bp Feature: gene Location: 1512706-1512909 bp Feature: gene Location: 1512912-1513193 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT PGRP (smart00701), SH3b (smart00287), CwlA (COG5632), RVT-GII, HNHc (smart00507)

Seq: JH791883.1 Bacillus cereus VD154 genomic scaffold supercont1.4, whole genome shotgun sequence (520959 bp)
Overview 1 RT 1: 290107-293610 bp Neighborhood of RT #1 [290107, 293610] INT_C_like_3 RVT-GII GIIM Feature: gene Location: 290107-290649 bp Feature: domain Description: INT_C_like_3 Location: 290116-290626 bp Feature: domain Description: INT_C_like_3 Location: 290116-290626 bp Feature: gene Location: 290849-290986 bp Feature: gene Location: 291841-293115 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 292042-292657 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 292042-29265 7 bp Feature: domain Description: GIIM Note: maturase Location: 292717-292924 bp Feature: domain Description: GIIM Note: maturase Location: 292717-292924 bp Feature: gene Location: 293214-293411 bp Feature: gene Location: 293398-293610 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT INT_C_like_3 (cd01192), RVT-GII, GIIM (pfam08388)