myRT

myRT report for GCA_000290875.1_Baci_cere_VD102_V1

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Seq: JH792239.1 Bacillus cereus VD102 genomic scaffold supercont1.1, whole genome shotgun sequence (4634962 bp)
Overview 1 RT 1: 951527-956651 bp 2 RT 2: 2549163-2555402 bp Neighborhood of RT #1 [951527, 956749] caa3_CtaG amiF RVT-GII HNHc amiF YugN Neighborhood of RT #2 [2549163, 2555404] DUF2085 PRK12451 RVT-GII Intron_maturas2 HNHc SAM_MT YphP_YqiW Feature: gene Location: 951527-952432 bp Feature: domain Description: caa3_CtaG Location: 951536-952376 bp Feature: domain Description: caa3_CtaG Location: 951 536-952376 bp Feature: gene Location: 952661-953050 bp Feature: domain Description: amiF Location: 952664-953036 bp Feature: domain Description: amiF Location: 952664-953036 bp Feature: gene Location: 953765-955597 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 954065-954770 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 954065-954770 bp Feature: domain Description: HNHc Note: nucleases Location: 955349-955481 bp Feature: domain Description: HNHc Note: nucleases Location: 955349-955481 bp Feature: gene Location: 955714-956337 bp Feature: domain Description: amiF Location: 955717-956332 bp Feature: domain Description: amiF Location: 95571 7-956332 bp Feature: gene Location: 956384-956749 bp Feature: domain Description: YugN Location: 956402-956651 bp Feature: domain Description: YugN Location: 956402-956651 bp Feature: gene Location: 2549163-2549492 bp Feature: domain Description: DUF2085 Location: 2549196-2549457 bp Feature: domain Description: DUF2085 Location: 25491 96-2549457 bp Feature: gene Location: 2549607-2551295 bp Feature: domain Description: PRK12451 Location: 2549610-2551293 bp Feature: domain Description: PRK1 2451 Location: 254961 0-2551 293 bp Feature: gene Location: 2551921-2553738 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 2552185-2553016 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 25521 85-255301 6 bp Feature: domain Description: Intron_maturas2 Location: 2553097-2553388 bp Feature: domain Description: Intron_maturas2 Location: 2553097-2553388 bp Feature: domain Description: HNHc Note: nucleases Location: 2553535-2553712 bp Feature: domain Description: HNHc Note: nucleases Location: 2553535-255371 2 bp Feature: gene Location: 2554354-2554920 bp Feature: domain Description: SAM_MT Location: 2554477-2554909 bp Feature: domain Description: SAM_MT Location: 2554477-2554909 bp Feature: gene Location: 2554970-2555404 bp Feature: domain Description: YphP_YqiW Location: 2554994-2555402 bp Feature: domain Description: YphP_YqiW Location: 2554994-2555402 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT caa3_CtaG (TIGR02737), amiF (PRK13287), RVT-GII, HNHc (smart00507), YugN (pfam08868), DUF2085 (pfam09858), PRK12451 (arginyl-tRNA synthetase; Reviewed), Intron_maturas2 (pfam01348), SAM_MT (pfam04445), YphP_YqiW (TIGR04191)

Seq: JH792241.1 Bacillus cereus VD102 genomic scaffold supercont1.3, whole genome shotgun sequence (318326 bp)
Overview 1 RT 1: 4998-11430 bp 2 RT 2: 19017-27595 bp 3 RT 3: 43017-49183 bp 4 RT 4: 307735-312382 bp Neighborhood of RT #1 [4998, 11430] DUF3854 RVT-GII GIIM HNHc Neighborhood of RT #2 [19017, 27693] Replic_Relax RVT-GII Intron_maturas2 HNHc TraG-D_C xerC Neighborhood of RT #3 [43017, 49183] TcpE AAA_10 RVT-GII HNHc AAA_10 Neighborhood of RT #4 [307735, 312489] RVT-GII HNHc E1_enzyme_family PRTRC_A Feature: gene Location: 4998-5228 bp Feature: gene Location: 5721-6962 bp Feature: domain Description: DUF3854 Location: 6609-6930 bp Feature: domain Description: DUF3854 Location: 6609-6930 bp Feature: gene Location: 6997-8892 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 7363-8062 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 7363-8062 bp Feature: domain Description: GIIM Note: maturase Location: 8146-8389 bp Feature: domain Description: GIIM Note: maturase Location: 8146-8389 bp Feature: domain Description: HNHc Note: nucleases Location: 8635-8773 bp Feature: domain Description: HNHc Note: nucleases Location: 8635-8773 bp Feature: gene Location: 9561-9704 bp Feature: gene Location: 9880-11430 bp Feature: gene Location: 19017-20567 bp Feature: domain Description: Replic_Relax Location: 19113-19836 bp Feature: domain Description: Replic_Relax Location: 19113-19836 bp Feature: gene Location: 20539-22227 bp Feature: gene Location: 22843-24660 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 23107-23938 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 2 3107-2 3938 bp Feature: domain Description: Intron_maturas2 Location: 24019-24310 bp Feature: domain Description: Intron_maturas2 Location: 2 4019-2 4310 bp Feature: domain Description: HNHc Note: nucleases Location: 24457-24634 bp Feature: domain Description: HNHc Note: nucleases Location: 2 4457-2 4634 bp Feature: gene Location: 24764-26161 bp Feature: domain Description: TraG-D_C Location: 24908-25271 bp Feature: domain Description: TraG-D_C Location: 2 4908-2 52 71 bp Feature: gene Location: 26728-27693 bp Feature: domain Description: xerC Location: 26746-27595 bp Feature: domain Description: xerC Location: 2 6746-2 7595 bp Feature: gene Location: 43017-43421 bp Feature: domain Description: TcpE Location: 43053-43326 bp Feature: domain Description: TcpE Location: 43053-4332 6 bp Feature: gene Location: 43481-45016 bp Feature: domain Description: AAA_10 Location: 44822-44999 bp Feature: domain Description: AAA_10 Location: 4482 2 -44999 bp Feature: gene Location: 45731-47563 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 46031-46736 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 46031-46736 bp Feature: domain Description: HNHc Note: nucleases Location: 47315-47447 bp Feature: domain Description: HNHc Note: nucleases Location: 47315-47447 bp Feature: gene Location: 47821-48699 bp Feature: domain Description: AAA_10 Location: 47827-48583 bp Feature: domain Description: AAA_10 Location: 4782 7-48583 bp Feature: gene Location: 48701-49183 bp Feature: gene Location: 307735-307863 bp Feature: gene Location: 307925-308428 bp Feature: gene Location: 308516-310396 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 308846-309575 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 308846-309575 bp Feature: domain Description: HNHc Note: nucleases Location: 310133-310283 bp Feature: domain Description: HNHc Note: nucleases Location: 310133-3102 83 bp Feature: gene Location: 311096-311497 bp Feature: domain Description: E1_enzyme_family Location: 311144-311480 bp Feature: domain Description: E1_enzyme_family Location: 311144-311480 bp Feature: gene Location: 311494-312489 bp Feature: domain Description: PRTRC_A Location: 312028-312382 bp Feature: domain Description: PRTRC_A Location: 312 02 8-312 382 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT DUF3854 (pfam12965), RVT-GII, GIIM (pfam08388), HNHc (smart00507), Replic_Relax (pfam13814), Intron_maturas2 (pfam01348), TraG-D_C (pfam12696), xerC (PRK01287), TcpE (pfam12648), AAA_10 (pfam12846)
E1_enzyme_family (cl22428), PRTRC_A (TIGR03735)