myRT

myRT report for GCA_000290935.2_Baci_cere_IS075_V2

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Seq: KE150018.1 Bacillus cereus IS075 genomic scaffold actac-supercont2.1, whole genome shotgun sequence (2400200 bp)
Overview 1 RT 1: 3896-10639 bp 2 RT 2: 76189-82464 bp 3 RT 3: 1476098-1482185 bp 4 RT 4: 2268746-2273744 bp Neighborhood of RT #1 [3896, 10641] IscR IDEAL RVT_N RVT-GII GIIM stp PRK02487 Neighborhood of RT #2 [76189, 82658] YbaK_EbsC GrpB RVT_N RVT-GII GIIM HTH_3 TPR Hydrolase_4 Neighborhood of RT #3 [1476098, 1482301] PRK06811 AsnB RVT-GII HNHc asn_synth_AEB PP2C_2 Neighborhood of RT #4 [2268746, 2273746] HxlR TTHA1623-like_MBL-fold RVT-GII HNHc metallo-hydrolase-like_MBL-fold PRK12856 Feature: gene Location: 3896-4309 bp Feature: domain Description: IscR Location: 3899-4292 bp Feature: domain Description: IscR Location: 3899-4292 bp Feature: gene Location: 4426-4761 bp Feature: domain Description: IDEAL Location: 4630-4726 bp Feature: domain Description: IDEAL Location: 4630-4726 bp Feature: gene Location: 5552-7198 bp Feature: RT Description: RVT_N Location: 5594-5831 bp Feature: RT Description: RVT_N Location: 5594-5831 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 5885-6545 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 5885-6545 bp Feature: domain Description: GIIM Note: maturase Location: 6614-6845 bp Feature: domain Description: GIIM Note: maturase Location: 661 4-6845 bp Feature: gene Location: 8272-9591 bp Feature: domain Description: stp Location: 8359-9559 bp Feature: domain Description: stp Location: 8359-9559 bp Feature: gene Location: 10165-10641 bp Feature: domain Description: PRK02487 Location: 10180-10639 bp Feature: domain Description: PRK02487 Location: 1 01 80-1 0639 bp Feature: gene Location: 76189-76665 bp Feature: domain Description: YbaK_EbsC Location: 76207-76657 bp Feature: domain Description: YbaK_EbsC Location: 76207-76657 bp Feature: gene Location: 77252-77782 bp Feature: domain Description: GrpB Location: 77264-77738 bp Feature: domain Description: GrpB Location: 77264-77738 bp Feature: gene Location: 78499-80145 bp Feature: RT Description: RVT_N Location: 78541-78778 bp Feature: RT Description: RVT_N Location: 78541 -78778 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 78832-79492 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 78832-79492 bp Feature: domain Description: GIIM Note: maturase Location: 79561-79792 bp Feature: domain Description: GIIM Note: maturase Location: 79561 -79792 bp Feature: gene Location: 80505-81629 bp Feature: domain Description: HTH_3 Location: 80535-80697 bp Feature: domain Description: HTH_3 Location: 80535-80697 bp Feature: domain Description: TPR Location: 81261-81384 bp Feature: domain Description: TPR Location: 81 261 -81 384 bp Feature: gene Location: 81639-82658 bp Feature: domain Description: Hydrolase_4 Location: 81804-82464 bp Feature: domain Description: Hydrolase_4 Location: 81 804-82464 bp Feature: gene Location: 1476098-1476664 bp Feature: domain Description: PRK06811 Location: 1476101-1476659 bp Feature: domain Description: PRK0681 1 Location: 1 4761 01 -1 476659 bp Feature: gene Location: 1476923-1477120 bp Feature: domain Description: AsnB Location: 1476932-1477109 bp Feature: domain Description: AsnB Location: 1 476932-1 4771 09 bp Feature: gene Location: 1477836-1479668 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1478136-1478841 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1 4781 36-1 478841 bp Feature: domain Description: HNHc Note: nucleases Location: 1479420-1479552 bp Feature: domain Description: HNHc Note: nucleases Location: 1 479420-1 479552 bp Feature: gene Location: 1479749-1481431 bp Feature: domain Description: asn_synth_AEB Location: 1479779-1481207 bp Feature: domain Description: asn_synth_AEB Location: 1 479779-1 481 207 bp Feature: gene Location: 1481474-1482301 bp Feature: domain Description: PP2C_2 Location: 1481846-1482185 bp Feature: domain Description: PP2C_2 Location: 1 481 846-1 4821 85 bp Feature: gene Location: 2268746-2269090 bp Feature: domain Description: HxlR Location: 2268797-2269079 bp Feature: domain Description: HxlR Location: 2268797-2269079 bp Feature: gene Location: 2269730-2270143 bp Feature: domain Description: TTHA1623-like_MBL-fold Location: 2269733-2270129 bp Feature: domain Description: TTHA1 623-like_MBL-fold Location: 2269733-22701 29 bp Feature: gene Location: 2270383-2272215 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 2270683-2271388 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 2270683-2271 388 bp Feature: domain Description: HNHc Note: nucleases Location: 2271967-2272099 bp Feature: domain Description: HNHc Note: nucleases Location: 2271 967-2272099 bp Feature: gene Location: 2272931-2273044 bp Feature: domain Description: metallo-hydrolase-like_MBL-fold Location: 2272946-2273033 bp Feature: domain Description: metallo-hydrolase-like_MBL-fold Location: 2272946-2273033 bp Feature: gene Location: 2273435-2273746 bp Feature: domain Description: PRK12856 Location: 2273438-2273744 bp Feature: domain Description: PRK1 2856 Location: 2273438-2273744 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT PRK02487 (heme-degrading domain-containing protein), IscR (TIGR02010), IDEAL (smart00914), RVT_N (pfam13655), RVT-GII, GIIM (pfam08388), stp (TIGR00814), YbaK_EbsC (TIGR00011), GrpB (pfam04229), HTH_3 (pfam01381)
TPR (smart00028), Hydrolase_4 (pfam12146), PRK06811 (RNA polymerase factor sigma-70; Validated), AsnB (COG0367), HNHc (smart00507), asn_synth_AEB (TIGR01536), PP2C_2 (pfam13672), HxlR (pfam01638), TTHA1623-like_MBL-fold (cd16322), metallo-hydrolase-like_MBL-fold (cl23716)
PRK12856 (hypothetical protein; Provisional)

Seq: KE150022.1 Bacillus cereus IS075 genomic scaffold actac-supercont2.5, whole genome shotgun sequence (332788 bp)
Overview 1 RT 1: 100489-107389 bp 2 RT 2: 165596-174445 bp 3 RT 3: 178220-183447 bp 4 RT 4: 245015-256630 bp Neighborhood of RT #1 [100489, 107436] InsQ HU RVT_N RVT-GII GIIM TRX_family Neighborhood of RT #2 [165596, 174624] TraG-D_C Ftsk_gamma Ftsk_gamma RVT_N RVT-GII GIIM nuc_hydro rpsA Neighborhood of RT #3 [178220, 183452] COG4712 RVT-GII beta_clamp Neighborhood of RT #4 [245015, 256630] RVT-GII HNHc MTS DEXDc RVT-GII HNHc HepA Feature: gene Location: 100489-101610 bp Feature: domain Description: InsQ Location: 100501-101584 bp Feature: domain Description: InsQ Location: 100501-101584 bp Feature: gene Location: 101859-102131 bp Feature: domain Description: HU Location: 101865-102120 bp Feature: domain Description: HU Location: 101865-102 12 0 bp Feature: gene Location: 102623-104269 bp Feature: RT Description: RVT_N Location: 102665-102902 bp Feature: RT Description: RVT_N Location: 102 665-102 902 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 102956-103616 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 102 956-103616 bp Feature: domain Description: GIIM Note: maturase Location: 103685-103916 bp Feature: domain Description: GIIM Note: maturase Location: 103685-103916 bp Feature: gene Location: 105377-105934 bp Feature: gene Location: 106954-107436 bp Feature: domain Description: TRX_family Location: 107134-107389 bp Feature: domain Description: TRX_family Location: 107134-107389 bp Feature: gene Location: 165596-165979 bp Feature: gene Location: 165997-169497 bp Feature: domain Description: TraG-D_C Location: 167614-167974 bp Feature: domain Description: TraG-D_C Location: 167614-167974 bp Feature: domain Description: Ftsk_gamma Location: 168382-168559 bp Feature: domain Description: Ftsk_gamma Location: 168382 -168559 bp Feature: domain Description: Ftsk_gamma Location: 168691-168826 bp Feature: domain Description: Ftsk_gamma Location: 168691-16882 6 bp Feature: gene Location: 169710-171356 bp Feature: RT Description: RVT_N Location: 169752-169989 bp Feature: RT Description: RVT_N Location: 169752 -169989 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 170043-170703 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 170043-170703 bp Feature: domain Description: GIIM Note: maturase Location: 170772-171003 bp Feature: domain Description: GIIM Note: maturase Location: 170772 -171003 bp Feature: gene Location: 172076-173026 bp Feature: domain Description: nuc_hydro Location: 172091-172997 bp Feature: domain Description: nuc_hydro Location: 172 091-172 997 bp Feature: gene Location: 173641-174624 bp Feature: domain Description: rpsA Location: 173908-174445 bp Feature: domain Description: rpsA Location: 173908-174445 bp Feature: gene Location: 178220-178615 bp Feature: gene Location: 178638-178994 bp Feature: domain Description: COG4712 Location: 178647-178989 bp Feature: domain Description: COG4712 Location: 178647-178989 bp Feature: gene Location: 179753-181654 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 180071-180773 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 180071-180773 bp Feature: gene Location: 181732-182259 bp Feature: gene Location: 182340-183452 bp Feature: domain Description: beta_clamp Location: 182343-183447 bp Feature: domain Description: beta_clamp Location: 182 343-183447 bp Feature: gene Location: 245015-245428 bp Feature: gene Location: 245450-245587 bp Feature: gene Location: 246469-248397 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 246790-247525 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 2 46790-2 4752 5 bp Feature: domain Description: HNHc Note: nucleases Location: 248116-248281 bp Feature: domain Description: HNHc Note: nucleases Location: 2 48116-2 482 81 bp Feature: gene Location: 248542-249663 bp Feature: domain Description: MTS Location: 248638-249001 bp Feature: domain Description: MTS Location: 2 48638-2 49001 bp Feature: gene Location: 249679-249906 bp Feature: gene Location: 249978-251657 bp Feature: domain Description: DEXDc Location: 250758-251631 bp Feature: domain Description: DEXDc Location: 2 50758-2 51631 bp Feature: gene Location: 252358-254157 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 252661-253363 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 2 52 661-2 53363 bp Feature: domain Description: HNHc Note: nucleases Location: 253888-254038 bp Feature: domain Description: HNHc Note: nucleases Location: 2 53888-2 54038 bp Feature: gene Location: 254218-255900 bp Feature: domain Description: HepA Location: 255112-255346 bp Feature: domain Description: HepA Location: 2 55112 -2 55346 bp Feature: gene Location: 255917-256630 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT InsQ (COG0675), HU (cd13831), RVT_N (pfam13655), RVT-GII, GIIM (pfam08388), TRX_family (cd02947), TraG-D_C (pfam12696), Ftsk_gamma (smart00843), nuc_hydro (cl00226), rpsA (TIGR00717)
COG4712 (Uncharacterized protein ), beta_clamp (cl29549), HNHc (smart00507), MTS (pfam05175), DEXDc (smart00487), HepA (COG0553)

Seq: KE150019.1 Bacillus cereus IS075 genomic scaffold actac-supercont2.2, whole genome shotgun sequence (774905 bp)
Overview 1 RT 1: 117-4605 bp Neighborhood of RT #1 [117, 4613] RVT-GII HNHc nitrilase_5 PRK08068 Feature: gene Location: 117-1949 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 417-1122 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 417-1122 bp Feature: domain Description: HNHc Note: nucleases Location: 1701-1833 bp Feature: domain Description: HNHc Note: nucleases Location: 1701-183 3 bp Feature: gene Location: 2665-3444 bp Feature: domain Description: nitrilase_5 Location: 2779-3430 bp Feature: domain Description: nitrilase_5 Location: 2779-3 43 0 bp Feature: gene Location: 3471-4613 bp Feature: domain Description: PRK08068 Location: 3474-4605 bp Feature: domain Description: PRK08068 Location: 3 474-4605 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, HNHc (smart00507), nitrilase_5 (cd07583), PRK08068 (transaminase; Reviewed)

Seq: KE150026.1 Bacillus cereus IS075 genomic scaffold actac-supercont2.9, whole genome shotgun sequence (92229 bp)
Overview 1 RT 1: 87871-92113 bp Neighborhood of RT #1 [87871, 92229] mtnA mtnK RVT-GII HNHc Feature: gene Location: 87871-88926 bp Feature: domain Description: mtnA Location: 87895-88918 bp Feature: domain Description: mtnA Location: 87895-88918 bp Feature: gene Location: 88923-90104 bp Feature: domain Description: mtnK Location: 88926-90084 bp Feature: domain Description: mtnK Location: 88926-90084 bp Feature: gene Location: 90649-92229 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 90697-91402 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 90697-914 02 bp Feature: domain Description: HNHc Note: nucleases Location: 91981-92113 bp Feature: domain Description: HNHc Note: nucleases Location: 91981-92113 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT mtnA (PRK05720), mtnK (PRK09550), RVT-GII, HNHc (smart00507)

Seq: KE150021.1 Bacillus cereus IS075 genomic scaffold actac-supercont2.4, whole genome shotgun sequence (587794 bp)
Overview 1 RT 1: 242041-252126 bp 2 RT 2: 584966-587678 bp Neighborhood of RT #1 [242041, 252126] B_ant_repeat B_ant_repeat B_ant_repeat B_ant_repeat B_ant_repeat B_ant_repeat B_ant_repeat B_ant_repeat B_ant_repeat B_ant_repeat B_ant_repeat B_ant_repeat B_ant_repeat B_ant_repeat B_ant_repeat RVT-GII HNHc Neighborhood of RT #2 [584966, 587794] YugN amiF RVT-GII HNHc Feature: gene Location: 242041-242418 bp Feature: domain Description: B_ant_repeat Location: 242050-242188 bp Feature: domain Description: B_ant_repeat Location: 24205 0-242188 bp Feature: gene Location: 242832-248405 bp Feature: domain Description: B_ant_repeat Location: 242835-242967 bp Feature: domain Description: B_ant_repeat Location: 242835 -242967 bp Feature: domain Description: B_ant_repeat Location: 243207-243360 bp Feature: domain Description: B_ant_repeat Location: 243207-243360 bp Feature: domain Description: B_ant_repeat Location: 243603-243759 bp Feature: domain Description: B_ant_repeat Location: 243603-24375 9 bp Feature: domain Description: B_ant_repeat Location: 243999-244155 bp Feature: domain Description: B_ant_repeat Location: 243999-24415 5 bp Feature: domain Description: B_ant_repeat Location: 244395-244551 bp Feature: domain Description: B_ant_repeat Location: 244395 -2445 5 1 bp Feature: domain Description: B_ant_repeat Location: 244791-244944 bp Feature: domain Description: B_ant_repeat Location: 244791-244944 bp Feature: domain Description: B_ant_repeat Location: 245187-245343 bp Feature: domain Description: B_ant_repeat Location: 245 187-245 343 bp Feature: domain Description: B_ant_repeat Location: 245583-245739 bp Feature: domain Description: B_ant_repeat Location: 245 5 83-245 739 bp Feature: domain Description: B_ant_repeat Location: 245979-246135 bp Feature: domain Description: B_ant_repeat Location: 245 979-246135 bp Feature: domain Description: B_ant_repeat Location: 246375-246528 bp Feature: domain Description: B_ant_repeat Location: 246375 -2465 28 bp Feature: domain Description: B_ant_repeat Location: 246771-246927 bp Feature: domain Description: B_ant_repeat Location: 246771-246927 bp Feature: domain Description: B_ant_repeat Location: 247167-247323 bp Feature: domain Description: B_ant_repeat Location: 247167-247323 bp Feature: domain Description: B_ant_repeat Location: 247563-247719 bp Feature: domain Description: B_ant_repeat Location: 2475 63-247719 bp Feature: domain Description: B_ant_repeat Location: 247959-248112 bp Feature: domain Description: B_ant_repeat Location: 24795 9-248112 bp Feature: gene Location: 248574-250502 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 248895-249630 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 248895 -249630 bp Feature: domain Description: HNHc Note: nucleases Location: 250221-250386 bp Feature: domain Description: HNHc Note: nucleases Location: 25 0221-25 0386 bp Feature: gene Location: 251509-251922 bp Feature: gene Location: 251935-252126 bp Feature: gene Location: 584966-585331 bp Feature: domain Description: YugN Location: 584984-585233 bp Feature: domain Description: YugN Location: 5 84984-5 85 233 bp Feature: gene Location: 585378-586001 bp Feature: domain Description: amiF Location: 585381-585996 bp Feature: domain Description: amiF Location: 5 85 381-5 85 996 bp Feature: gene Location: 586118-587794 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 586262-586967 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 5 86262-5 86967 bp Feature: domain Description: HNHc Note: nucleases Location: 587546-587678 bp Feature: domain Description: HNHc Note: nucleases Location: 5 875 46-5 87678 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT B_ant_repeat (TIGR01451), RVT-GII, HNHc (smart00507), YugN (pfam08868), amiF (PRK13287)

Seq: KE150027.1 Bacillus cereus IS075 genomic scaffold actac-supercont2.10, whole genome shotgun sequence (80738 bp)
Overview 1 RT 1: 24704-31032 bp 2 RT 2: 71044-76826 bp Neighborhood of RT #1 [24704, 31032] TcpE TraC-F-type AAA_10 RVT-GII HNHc AAA_10 Neighborhood of RT #2 [71044, 76843] ParM_like NlpD RVT_N RVT-GII GIIM IDEAL IscR Feature: gene Location: 24704-25255 bp Feature: domain Description: TcpE Location: 24776-25052 bp Feature: domain Description: TcpE Location: 24776 -25052 bp Feature: gene Location: 25215-26822 bp Feature: domain Description: TraC-F-type Location: 26001-26490 bp Feature: domain Description: TraC-F-type Location: 26 001-26 490 bp Feature: domain Description: AAA_10 Location: 26625-26805 bp Feature: domain Description: AAA_10 Location: 26 6 25-26 805 bp Feature: gene Location: 27538-29370 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 27838-28543 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 27838-28543 bp Feature: domain Description: HNHc Note: nucleases Location: 29122-29254 bp Feature: domain Description: HNHc Note: nucleases Location: 29122-29254 bp Feature: gene Location: 29451-30464 bp Feature: domain Description: AAA_10 Location: 29490-30417 bp Feature: domain Description: AAA_10 Location: 29490-30417 bp Feature: gene Location: 30523-31032 bp Feature: gene Location: 71044-72210 bp Feature: domain Description: ParM_like Location: 71110-72169 bp Feature: domain Description: ParM_like Location: 71110-7216 9 bp Feature: gene Location: 72781-73347 bp Feature: domain Description: NlpD Location: 72985-73336 bp Feature: domain Description: NlpD Location: 72985-73336 bp Feature: gene Location: 73541-75187 bp Feature: RT Description: RVT_N Location: 73583-73820 bp Feature: RT Description: RVT_N Location: 73583-73820 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 73874-74534 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 73874-74534 bp Feature: domain Description: GIIM Note: maturase Location: 74603-74834 bp Feature: domain Description: GIIM Note: maturase Location: 746 03-74834 bp Feature: gene Location: 75978-76313 bp Feature: domain Description: IDEAL Location: 76182-76278 bp Feature: domain Description: IDEAL Location: 76 182-76 278 bp Feature: gene Location: 76430-76843 bp Feature: domain Description: IscR Location: 76433-76826 bp Feature: domain Description: IscR Location: 76 433-76 826 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT TcpE (pfam12648), TraC-F-type (TIGR02746), AAA_10 (pfam12846), RVT-GII, HNHc (smart00507), ParM_like (cd10227), NlpD (COG0739), RVT_N (pfam13655), GIIM (pfam08388), IDEAL (smart00914)
IscR (TIGR02010)