myRT

myRT report for GCA_000290995.1_Baci_cere_AND1407_G13175_V1

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Seq: JH792267.1 Bacillus cereus AND1407 genomic scaffold supercont1.6, whole genome shotgun sequence (222174 bp)
Overview 1 RT 1: 72268-79219 bp 2 RT 2: 143035-148267 bp 3 RT 3: 151864-160898 bp Neighborhood of RT #1 [72268, 79219] HepA RVT-GII HNHc DEXDc Neighborhood of RT #2 [143035, 148267] beta_clamp RVT-GII COG4712 Neighborhood of RT #3 [151864, 160898] rpsA nuc_hydro RVT_N RVT-GII GIIM TraG-D_C Ftsk_gamma Ftsk_gamma Feature: gene Location: 72268-72981 bp Feature: gene Location: 72998-74680 bp Feature: domain Description: HepA Location: 73892-74126 bp Feature: domain Description: HepA Location: 73892-741 26 bp Feature: gene Location: 74741-76540 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 75044-75746 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 75044-75746 bp Feature: domain Description: HNHc Note: nucleases Location: 76271-76421 bp Feature: domain Description: HNHc Note: nucleases Location: 76271 -76421 bp Feature: gene Location: 77241-78920 bp Feature: domain Description: DEXDc Location: 78021-78894 bp Feature: domain Description: DEXDc Location: 78021 -78894 bp Feature: gene Location: 78992-79219 bp Feature: gene Location: 143035-144147 bp Feature: domain Description: beta_clamp Location: 143038-144142 bp Feature: domain Description: beta_clamp Location: 1 43038-1 441 42 bp Feature: gene Location: 144228-144755 bp Feature: gene Location: 144833-146734 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 145151-145853 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1 451 51 -1 45853 bp Feature: gene Location: 147493-147849 bp Feature: domain Description: COG4712 Location: 147502-147844 bp Feature: domain Description: COG471 2 Location: 1 47502-1 47844 bp Feature: gene Location: 147872-148267 bp Feature: gene Location: 151864-152847 bp Feature: domain Description: rpsA Location: 152131-152668 bp Feature: domain Description: rpsA Location: 1 521 31 -1 52668 bp Feature: gene Location: 153462-154412 bp Feature: domain Description: nuc_hydro Location: 153477-154383 bp Feature: domain Description: nuc_hydro Location: 1 53477-1 54383 bp Feature: gene Location: 155132-156778 bp Feature: RT Description: RVT_N Location: 155174-155411 bp Feature: RT Description: RVT_N Location: 1 551 74-1 5541 1 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 155465-156125 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1 55465-1 561 25 bp Feature: domain Description: GIIM Note: maturase Location: 156194-156425 bp Feature: domain Description: GIIM Note: maturase Location: 1 561 94-1 56425 bp Feature: gene Location: 156991-160491 bp Feature: domain Description: TraG-D_C Location: 158608-158968 bp Feature: domain Description: TraG-D_C Location: 1 58608-1 58968 bp Feature: domain Description: Ftsk_gamma Location: 159376-159553 bp Feature: domain Description: Ftsk_gamma Location: 1 59376-1 59553 bp Feature: domain Description: Ftsk_gamma Location: 159685-159820 bp Feature: domain Description: Ftsk_gamma Location: 1 59685-1 59820 bp Feature: gene Location: 160509-160898 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT HepA (COG0553), RVT-GII, HNHc (smart00507), DEXDc (smart00487), beta_clamp (cl29549), COG4712 (Uncharacterized protein ), rpsA (TIGR00717), nuc_hydro (cl00226), RVT_N (pfam13655), GIIM (pfam08388)
TraG-D_C (pfam12696), Ftsk_gamma (smart00843)

Seq: JH792271.1 Bacillus cereus AND1407 genomic scaffold supercont1.10, whole genome shotgun sequence (68648 bp)
Overview 1 RT 1: 41526-48165 bp Neighborhood of RT #1 [41526, 48179] ParM_like NlpD RVT_N RVT-GII GIIM nuc_hydro ManC Feature: gene Location: 41526-42692 bp Feature: domain Description: ParM_like Location: 41592-42651 bp Feature: domain Description: ParM_like Location: 41592 -42 651 bp Feature: gene Location: 43263-43829 bp Feature: domain Description: NlpD Location: 43467-43818 bp Feature: domain Description: NlpD Location: 43467-43818 bp Feature: gene Location: 44023-45669 bp Feature: RT Description: RVT_N Location: 44065-44302 bp Feature: RT Description: RVT_N Location: 44065-44302 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 44356-45016 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 44356-45016 bp Feature: domain Description: GIIM Note: maturase Location: 45085-45316 bp Feature: domain Description: GIIM Note: maturase Location: 45085-45316 bp Feature: gene Location: 46389-47339 bp Feature: domain Description: nuc_hydro Location: 46404-47310 bp Feature: domain Description: nuc_hydro Location: 46404-47310 bp Feature: gene Location: 47601-48179 bp Feature: domain Description: ManC Location: 47799-48165 bp Feature: domain Description: ManC Location: 47799-48165 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT ParM_like (cd10227), NlpD (COG0739), RVT_N (pfam13655), RVT-GII, GIIM (pfam08388), nuc_hydro (cl00226), ManC (COG0662)

Seq: JH792262.1 Bacillus cereus AND1407 genomic scaffold supercont1.1, whole genome shotgun sequence (2150709 bp)
Overview 1 RT 1: 4775-11519 bp 2 RT 2: 102724-107673 bp 3 RT 3: 1176167-1182587 bp 4 RT 4: 2145936-2149742 bp Neighborhood of RT #1 [4775, 11572] TcpE TraC-F-type AAA_10 RVT-GII HNHc SgrR MFS_MdtH_MDR_like Neighborhood of RT #2 [102724, 107696] COG1787 RVT-GII RVT-GII GIIM Dcm Cyt_C5_DNA_methylase Neighborhood of RT #3 [1176167, 1183018] YphP_YqiW SAM_MT RVT-GII Intron_maturas2 HNHc PRK12451 Methyltransf_31 Neighborhood of RT #4 [2145936, 2150095] Hydrolase_4 HTH_3 TPR RVT_N RVT-GII GIIM Feature: gene Location: 4775-5326 bp Feature: domain Description: TcpE Location: 4847-5123 bp Feature: domain Description: TcpE Location: 4847-5123 bp Feature: gene Location: 5286-6893 bp Feature: domain Description: TraC-F-type Location: 6072-6561 bp Feature: domain Description: TraC-F-type Location: 6072-6561 bp Feature: domain Description: AAA_10 Location: 6696-6876 bp Feature: domain Description: AAA_10 Location: 6696-6876 bp Feature: gene Location: 7609-9441 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 7909-8590 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 7909-8590 bp Feature: domain Description: HNHc Note: nucleases Location: 9193-9325 bp Feature: domain Description: HNHc Note: nucleases Location: 9193 -93 25 bp Feature: gene Location: 9542-10210 bp Feature: domain Description: SgrR Location: 9557-10193 bp Feature: domain Description: SgrR Location: 9557-10193 bp Feature: gene Location: 10316-11572 bp Feature: domain Description: MFS_MdtH_MDR_like Location: 10346-11519 bp Feature: domain Description: MFS_MdtH_MDR_like Location: 103 46-11519 bp Feature: gene Location: 102724-102903 bp Feature: gene Location: 102851-103264 bp Feature: domain Description: COG1787 Location: 102890-103247 bp Feature: domain Description: COG1787 Location: 102890-103 247 bp Feature: gene Location: 103564-103839 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 103591-103834 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 103 591-103 83 4 bp Feature: gene Location: 103873-104256 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 103876-103963 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 103 876-103 963 bp Feature: domain Description: GIIM Note: maturase Location: 104044-104248 bp Feature: domain Description: GIIM Note: maturase Location: 104044-104248 bp Feature: gene Location: 105247-106653 bp Feature: domain Description: Dcm Location: 105511-106630 bp Feature: domain Description: Dcm Location: 105511-10663 0 bp Feature: gene Location: 106650-107696 bp Feature: domain Description: Cyt_C5_DNA_methylase Location: 106659-107673 bp Feature: domain Description: Cyt_C5_DNA_methylase Location: 106659-107673 bp Feature: gene Location: 1176167-1176601 bp Feature: domain Description: YphP_YqiW Location: 1176191-1176599 bp Feature: domain Description: YphP_YqiW Location: 1176191-1176599 bp Feature: gene Location: 1176651-1177217 bp Feature: domain Description: SAM_MT Location: 1176774-1177206 bp Feature: domain Description: SAM_MT Location: 1176774-1177206 bp Feature: gene Location: 1177833-1179650 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1178097-1178928 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1178097-1178928 bp Feature: domain Description: Intron_maturas2 Location: 1179009-1179300 bp Feature: domain Description: Intron_maturas2 Location: 1179009-11793 00 bp Feature: domain Description: HNHc Note: nucleases Location: 1179447-1179624 bp Feature: domain Description: HNHc Note: nucleases Location: 1179447-1179624 bp Feature: gene Location: 1180276-1181964 bp Feature: domain Description: PRK12451 Location: 1180279-1181962 bp Feature: domain Description: PRK12451 Location: 1180279-1181962 bp Feature: gene Location: 1182140-1183018 bp Feature: domain Description: Methyltransf_31 Location: 1182251-1182587 bp Feature: domain Description: Methyltransf_3 1 Location: 1182251-1182587 bp Feature: gene Location: 2145936-2146955 bp Feature: domain Description: Hydrolase_4 Location: 2146101-2146761 bp Feature: domain Description: Hydrolase_4 Location: 2146101-2146761 bp Feature: gene Location: 2146965-2148089 bp Feature: domain Description: HTH_3 Location: 2146995-2147157 bp Feature: domain Description: HTH_3 Location: 2146995-2147157 bp Feature: domain Description: TPR Location: 2147721-2147844 bp Feature: domain Description: TPR Location: 2147721-2147844 bp Feature: gene Location: 2148449-2150095 bp Feature: RT Description: RVT_N Location: 2148491-2148728 bp Feature: RT Description: RVT_N Location: 2148491-2148728 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 2148782-2149442 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 2148782-2149442 bp Feature: domain Description: GIIM Note: maturase Location: 2149511-2149742 bp Feature: domain Description: GIIM Note: maturase Location: 2149511-2149742 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT TcpE (pfam12648), TraC-F-type (TIGR02746), AAA_10 (pfam12846), RVT-GII, HNHc (smart00507), SgrR (COG4533), COG1787 (Endonuclease, HJR/Mrr/RecB family ), GIIM (pfam08388), Dcm (COG0270), Cyt_C5_DNA_methylase (cl30459)
YphP_YqiW (TIGR04191), SAM_MT (pfam04445), Intron_maturas2 (pfam01348), PRK12451 (arginyl-tRNA synthetase; Reviewed), Methyltransf_31 (pfam13847), Hydrolase_4 (pfam12146), HTH_3 (pfam01381), TPR (smart00028), RVT_N (pfam13655)

Seq: JH792264.1 Bacillus cereus AND1407 genomic scaffold supercont1.3, whole genome shotgun sequence (701522 bp)
Overview 1 RT 1: 734-5336 bp 2 RT 2: 30713-35061 bp 3 RT 3: 367700-378741 bp 4 RT 4: 697454-701057 bp Neighborhood of RT #1 [734, 5344] RVT-GII HNHc mtnK mtnA Neighborhood of RT #2 [30713, 35072] HTH_MlrA-like_sg1 DUF3967 RVT-GII Intron_maturas2 HNHc ComJ Neighborhood of RT #3 [367700, 378741] RVT-GII HNHc B_ant_repeat B_ant_repeat B_ant_repeat B_ant_repeat B_ant_repeat B_ant_repeat B_ant_repeat B_ant_repeat B_ant_repeat B_ant_repeat B_ant_repeat B_ant_repeat B_ant_repeat B_ant_repeat B_ant_repeat B_ant_repeat Neighborhood of RT #4 [697454, 701410] YbaK_EbsC GrpB RVT_N RVT-GII GIIM Feature: gene Location: 734-2566 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1034-1739 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1034 -1739 bp Feature: domain Description: HNHc Note: nucleases Location: 2318-2450 bp Feature: domain Description: HNHc Note: nucleases Location: 2318-24 50 bp Feature: gene Location: 3111-4292 bp Feature: domain Description: mtnK Location: 3114-4272 bp Feature: domain Description: mtnK Location: 3114 -4 272 bp Feature: gene Location: 4289-5344 bp Feature: domain Description: mtnA Location: 4313-5336 bp Feature: domain Description: mtnA Location: 4 313-5336 bp Feature: gene Location: 30713-31462 bp Feature: domain Description: HTH_MlrA-like_sg1 Location: 30728-30884 bp Feature: domain Description: HTH_MlrA-like_sg1 Location: 30728-30884 bp Feature: domain Description: DUF3967 Location: 31316-31409 bp Feature: domain Description: DUF3967 Location: 31316-314 09 bp Feature: gene Location: 31699-32016 bp Feature: gene Location: 32621-34414 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 32864-33695 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 32864 -33695 bp Feature: domain Description: Intron_maturas2 Location: 33776-34064 bp Feature: domain Description: Intron_maturas2 Location: 33776-34 064 bp Feature: domain Description: HNHc Note: nucleases Location: 34244-34385 bp Feature: domain Description: HNHc Note: nucleases Location: 34 24 4 -34 385 bp Feature: gene Location: 34482-34646 bp Feature: gene Location: 34683-35072 bp Feature: domain Description: ComJ Location: 34689-35061 bp Feature: domain Description: ComJ Location: 34 689-35061 bp Feature: gene Location: 367700-367891 bp Feature: gene Location: 367904-368317 bp Feature: gene Location: 369324-371252 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 369645-370380 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 36964 5-370380 bp Feature: domain Description: HNHc Note: nucleases Location: 370971-371136 bp Feature: domain Description: HNHc Note: nucleases Location: 370971-371136 bp Feature: gene Location: 371421-377786 bp Feature: domain Description: B_ant_repeat Location: 371430-371568 bp Feature: domain Description: B_ant_repeat Location: 3714 30-371568 bp Feature: domain Description: B_ant_repeat Location: 371805-371958 bp Feature: domain Description: B_ant_repeat Location: 371805-371958 bp Feature: domain Description: B_ant_repeat Location: 372195-372348 bp Feature: domain Description: B_ant_repeat Location: 372195-37234 8 bp Feature: domain Description: B_ant_repeat Location: 372588-372741 bp Feature: domain Description: B_ant_repeat Location: 372588-37274 1 bp Feature: domain Description: B_ant_repeat Location: 372984-373140 bp Feature: domain Description: B_ant_repeat Location: 372984 -37314 0 bp Feature: domain Description: B_ant_repeat Location: 373380-373536 bp Feature: domain Description: B_ant_repeat Location: 373380-373536 bp Feature: domain Description: B_ant_repeat Location: 373776-373932 bp Feature: domain Description: B_ant_repeat Location: 373776-373932 bp Feature: domain Description: B_ant_repeat Location: 374172-374325 bp Feature: domain Description: B_ant_repeat Location: 374 172-374 325 bp Feature: domain Description: B_ant_repeat Location: 374568-374724 bp Feature: domain Description: B_ant_repeat Location: 374 568-374 724 bp Feature: domain Description: B_ant_repeat Location: 374964-375120 bp Feature: domain Description: B_ant_repeat Location: 374 964 -375120 bp Feature: domain Description: B_ant_repeat Location: 375360-375516 bp Feature: domain Description: B_ant_repeat Location: 375360-375516 bp Feature: domain Description: B_ant_repeat Location: 375756-375909 bp Feature: domain Description: B_ant_repeat Location: 375756-375909 bp Feature: domain Description: B_ant_repeat Location: 376152-376308 bp Feature: domain Description: B_ant_repeat Location: 376152-376308 bp Feature: domain Description: B_ant_repeat Location: 376548-376704 bp Feature: domain Description: B_ant_repeat Location: 37654 8-376704 bp Feature: domain Description: B_ant_repeat Location: 376944-377100 bp Feature: domain Description: B_ant_repeat Location: 37694 4 -377100 bp Feature: domain Description: B_ant_repeat Location: 377340-377493 bp Feature: domain Description: B_ant_repeat Location: 37734 0-3774 93 bp Feature: gene Location: 378064-378741 bp Feature: gene Location: 697454-697930 bp Feature: domain Description: YbaK_EbsC Location: 697472-697922 bp Feature: domain Description: YbaK_EbsC Location: 6974 72-697922 bp Feature: gene Location: 698517-699047 bp Feature: domain Description: GrpB Location: 698529-699003 bp Feature: domain Description: GrpB Location: 698529-699003 bp Feature: gene Location: 699764-701410 bp Feature: RT Description: RVT_N Location: 699806-700043 bp Feature: RT Description: RVT_N Location: 699806-70004 3 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 700097-700757 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 700097-700757 bp Feature: domain Description: GIIM Note: maturase Location: 700826-701057 bp Feature: domain Description: GIIM Note: maturase Location: 700826-701057 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT mtnK (PRK09550), mtnA (PRK05720), RVT-GII, HNHc (smart00507), HTH_MlrA-like_sg1 (cd04764), DUF3967 (pfam13152), Intron_maturas2 (pfam01348), ComJ (pfam11033), B_ant_repeat (TIGR01451), YbaK_EbsC (TIGR00011)
GrpB (pfam04229), RVT_N (pfam13655), GIIM (pfam08388)

Seq: JH792270.1 Bacillus cereus AND1407 genomic scaffold supercont1.9, whole genome shotgun sequence (116923 bp)
Overview 1 RT 1: 114706-116924 bp Neighborhood of RT #1 [114706, 116923] PRK12856 metallo-hydrolase-like_MBL-fold RVT-GII Feature: gene Location: 114706-115017 bp Feature: domain Description: PRK12856 Location: 114709-115015 bp Feature: domain Description: PRK1285 6 Location: 114709-115 015 bp Feature: gene Location: 115408-115521 bp Feature: domain Description: metallo-hydrolase-like_MBL-fold Location: 115423-115510 bp Feature: domain Description: metallo-hydrolase-like_MBL-fold Location: 115 423-115 5 10 bp Feature: gene Location: 116237-116923 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 116537-116924 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1165 37-116924 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT PRK12856 (hypothetical protein; Provisional), metallo-hydrolase-like_MBL-fold (cl23716), RVT-GII