myRT

myRT report for GCA_000291235.1_Baci_cere_MSX-A12_V1

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Seq: JH792030.1 Bacillus cereus MSX-A12 genomic scaffold supercont1.2, whole genome shotgun sequence (1533405 bp)
Overview 1 RT 1: 1139302-1144300 bp Neighborhood of RT #1 [1139302, 1144302] HxlR TTHA1623-like_MBL-fold RVT-GII HNHc metallo-hydrolase-like_MBL-fold PRK12856 Feature: gene Location: 1139302-1139646 bp Feature: domain Description: HxlR Location: 1139353-1139635 bp Feature: domain Description: HxlR Location: 1 1 39353-1 1 39635 bp Feature: gene Location: 1140286-1140699 bp Feature: domain Description: TTHA1623-like_MBL-fold Location: 1140289-1140685 bp Feature: domain Description: TTHA1 623-like_MBL-fold Location: 1 1 40289-1 1 40685 bp Feature: gene Location: 1140939-1142771 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1141239-1141944 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1 1 41 239-1 1 41 944 bp Feature: domain Description: HNHc Note: nucleases Location: 1142523-1142655 bp Feature: domain Description: HNHc Note: nucleases Location: 1 1 42523-1 1 42655 bp Feature: gene Location: 1143487-1143600 bp Feature: domain Description: metallo-hydrolase-like_MBL-fold Location: 1143502-1143589 bp Feature: domain Description: metallo-hydrolase-like_MBL-fold Location: 1 1 43502-1 1 43589 bp Feature: gene Location: 1143991-1144302 bp Feature: domain Description: PRK12856 Location: 1143994-1144300 bp Feature: domain Description: PRK1 2856 Location: 1 1 43994-1 1 44300 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT HxlR (pfam01638), TTHA1623-like_MBL-fold (cd16322), RVT-GII, HNHc (smart00507), metallo-hydrolase-like_MBL-fold (cl23716), PRK12856 (hypothetical protein; Provisional)

Seq: JH792029.1 Bacillus cereus MSX-A12 genomic scaffold supercont1.1, whole genome shotgun sequence (2071926 bp)
Overview 1 RT 1: 649281-659136 bp 2 RT 2: 905736-912672 bp 3 RT 3: 978363-984638 bp Neighborhood of RT #1 [649281, 659366] RVT-GII HNHc B_ant_repeat B_ant_repeat B_ant_repeat B_ant_repeat B_ant_repeat B_ant_repeat B_ant_repeat B_ant_repeat B_ant_repeat B_ant_repeat B_ant_repeat B_ant_repeat B_ant_repeat B_ant_repeat B_ant_repeat Neighborhood of RT #2 [905736, 912674] IscR IDEAL RVT_N RVT-GII GIIM stp PRK02487 Neighborhood of RT #3 [978363, 984832] YbaK_EbsC GrpB RVT_N RVT-GII GIIM HTH_3 TPR Hydrolase_4 Feature: gene Location: 649281-649472 bp Feature: gene Location: 649485-649898 bp Feature: gene Location: 650905-652833 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 651226-651961 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 6512 2 6-651961 bp Feature: domain Description: HNHc Note: nucleases Location: 652552-652717 bp Feature: domain Description: HNHc Note: nucleases Location: 652 552 -652 717 bp Feature: gene Location: 653002-658575 bp Feature: domain Description: B_ant_repeat Location: 653005-653137 bp Feature: domain Description: B_ant_repeat Location: 653005-653137 bp Feature: domain Description: B_ant_repeat Location: 653377-653530 bp Feature: domain Description: B_ant_repeat Location: 653377-653530 bp Feature: domain Description: B_ant_repeat Location: 653773-653929 bp Feature: domain Description: B_ant_repeat Location: 653773-65392 9 bp Feature: domain Description: B_ant_repeat Location: 654169-654325 bp Feature: domain Description: B_ant_repeat Location: 654169-65432 5 bp Feature: domain Description: B_ant_repeat Location: 654565-654721 bp Feature: domain Description: B_ant_repeat Location: 654565-65472 1 bp Feature: domain Description: B_ant_repeat Location: 654961-655114 bp Feature: domain Description: B_ant_repeat Location: 654961-655114 bp Feature: domain Description: B_ant_repeat Location: 655357-655513 bp Feature: domain Description: B_ant_repeat Location: 655357-655513 bp Feature: domain Description: B_ant_repeat Location: 655753-655909 bp Feature: domain Description: B_ant_repeat Location: 655753-655909 bp Feature: domain Description: B_ant_repeat Location: 656149-656305 bp Feature: domain Description: B_ant_repeat Location: 656149-656305 bp Feature: domain Description: B_ant_repeat Location: 656545-656698 bp Feature: domain Description: B_ant_repeat Location: 656545-656698 bp Feature: domain Description: B_ant_repeat Location: 656941-657097 bp Feature: domain Description: B_ant_repeat Location: 656941-657097 bp Feature: domain Description: B_ant_repeat Location: 657337-657493 bp Feature: domain Description: B_ant_repeat Location: 657337-657493 bp Feature: domain Description: B_ant_repeat Location: 657733-657889 bp Feature: domain Description: B_ant_repeat Location: 657733-657889 bp Feature: domain Description: B_ant_repeat Location: 658129-658282 bp Feature: domain Description: B_ant_repeat Location: 65812 9-6582 82 bp Feature: gene Location: 658989-659366 bp Feature: domain Description: B_ant_repeat Location: 658998-659136 bp Feature: domain Description: B_ant_repeat Location: 658998-659136 bp Feature: gene Location: 905736-906149 bp Feature: domain Description: IscR Location: 905739-906132 bp Feature: domain Description: IscR Location: 905739-906132 bp Feature: gene Location: 906266-906601 bp Feature: domain Description: IDEAL Location: 906470-906566 bp Feature: domain Description: IDEAL Location: 906470-906566 bp Feature: gene Location: 907392-909038 bp Feature: RT Description: RVT_N Location: 907434-907671 bp Feature: RT Description: RVT_N Location: 907434-907671 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 907725-908385 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 90772 5-908385 bp Feature: domain Description: GIIM Note: maturase Location: 908454-908685 bp Feature: domain Description: GIIM Note: maturase Location: 908454-908685 bp Feature: gene Location: 910305-911624 bp Feature: domain Description: stp Location: 910392-911592 bp Feature: domain Description: stp Location: 910392 -911592 bp Feature: gene Location: 912198-912674 bp Feature: domain Description: PRK02487 Location: 912213-912672 bp Feature: domain Description: PRK02 487 Location: 912 2 13-912 672 bp Feature: gene Location: 978363-978839 bp Feature: domain Description: YbaK_EbsC Location: 978381-978831 bp Feature: domain Description: YbaK_EbsC Location: 978381-978831 bp Feature: gene Location: 979426-979956 bp Feature: domain Description: GrpB Location: 979438-979912 bp Feature: domain Description: GrpB Location: 979438-979912 bp Feature: gene Location: 980673-982319 bp Feature: RT Description: RVT_N Location: 980715-980952 bp Feature: RT Description: RVT_N Location: 980715-980952 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 981006-981666 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 981006-981666 bp Feature: domain Description: GIIM Note: maturase Location: 981735-981966 bp Feature: domain Description: GIIM Note: maturase Location: 981735-981966 bp Feature: gene Location: 982679-983803 bp Feature: domain Description: HTH_3 Location: 982709-982871 bp Feature: domain Description: HTH_3 Location: 982 709-982 871 bp Feature: domain Description: TPR Location: 983435-983558 bp Feature: domain Description: TPR Location: 983435-983558 bp Feature: gene Location: 983813-984832 bp Feature: domain Description: Hydrolase_4 Location: 983978-984638 bp Feature: domain Description: Hydrolase_4 Location: 983978-984638 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, HNHc (smart00507), B_ant_repeat (TIGR01451), IscR (TIGR02010), IDEAL (smart00914), RVT_N (pfam13655), GIIM (pfam08388), stp (TIGR00814), PRK02487 (heme-degrading domain-containing protein), YbaK_EbsC (TIGR00011)
GrpB (pfam04229), HTH_3 (pfam01381), TPR (smart00028), Hydrolase_4 (pfam12146)

Seq: JH792032.1 Bacillus cereus MSX-A12 genomic scaffold supercont1.4, whole genome shotgun sequence (186148 bp)
Overview 1 RT 1: 76886-81778 bp 2 RT 2: 144107-149339 bp 3 RT 3: 152935-161966 bp Neighborhood of RT #1 [76886, 81778] MTS RVT-GII HNHc Neighborhood of RT #2 [144107, 149339] beta_clamp RVT-GII COG4712 Neighborhood of RT #3 [152935, 161966] rpsA nuc_hydro RVT_N RVT-GII GIIM TraG-D_C Ftsk_gamma Ftsk_gamma Feature: gene Location: 76886-77113 bp Feature: gene Location: 77129-78250 bp Feature: domain Description: MTS Location: 77225-77588 bp Feature: domain Description: MTS Location: 77225-77588 bp Feature: gene Location: 78395-80323 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 78716-79451 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 78716-79451 bp Feature: domain Description: HNHc Note: nucleases Location: 80042-80207 bp Feature: domain Description: HNHc Note: nucleases Location: 80042-80207 bp Feature: gene Location: 81206-81349 bp Feature: gene Location: 81365-81778 bp Feature: gene Location: 144107-145219 bp Feature: domain Description: beta_clamp Location: 144110-145214 bp Feature: domain Description: beta_clamp Location: 144110-145214 bp Feature: gene Location: 145300-145827 bp Feature: gene Location: 145905-147806 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 146223-146925 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 146223 -146925 bp Feature: gene Location: 148565-148921 bp Feature: domain Description: COG4712 Location: 148574-148916 bp Feature: domain Description: COG4712 Location: 148574-148916 bp Feature: gene Location: 148944-149339 bp Feature: gene Location: 152935-153918 bp Feature: domain Description: rpsA Location: 153202-153739 bp Feature: domain Description: rpsA Location: 153 202-153 73 9 bp Feature: gene Location: 154533-155483 bp Feature: domain Description: nuc_hydro Location: 154548-155454 bp Feature: domain Description: nuc_hydro Location: 154548-155454 bp Feature: gene Location: 156203-157849 bp Feature: RT Description: RVT_N Location: 156245-156482 bp Feature: RT Description: RVT_N Location: 156245-156482 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 156536-157196 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 15653 6-157196 bp Feature: domain Description: GIIM Note: maturase Location: 157265-157496 bp Feature: domain Description: GIIM Note: maturase Location: 157265-157496 bp Feature: gene Location: 158062-161562 bp Feature: domain Description: TraG-D_C Location: 159679-160039 bp Feature: domain Description: TraG-D_C Location: 159679-16003 9 bp Feature: domain Description: Ftsk_gamma Location: 160447-160624 bp Feature: domain Description: Ftsk_gamma Location: 160447-160624 bp Feature: domain Description: Ftsk_gamma Location: 160756-160891 bp Feature: domain Description: Ftsk_gamma Location: 160756-160891 bp Feature: gene Location: 161580-161966 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT MTS (pfam05175), RVT-GII, HNHc (smart00507), beta_clamp (cl29549), COG4712 (Uncharacterized protein ), rpsA (TIGR00717), nuc_hydro (cl00226), RVT_N (pfam13655), GIIM (pfam08388), TraG-D_C (pfam12696)
Ftsk_gamma (smart00843)