myRT

myRT report for GCA_000291255.1_Baci_cere_VD014_V1

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Seq: JH792026.1 Bacillus cereus VD014 genomic scaffold supercont1.2, whole genome shotgun sequence (614598 bp)
Overview 1 RT 1: 353522-361118 bp Neighborhood of RT #1 [353522, 361118] rpsA TraG-D_C Ftsk_gamma Ftsk_gamma RVT-GII HNHc Feature: gene Location: 353522-354505 bp Feature: domain Description: rpsA Location: 353789-354326 bp Feature: domain Description: rpsA Location: 353789-354326 bp Feature: gene Location: 354764-356869 bp Feature: domain Description: TraG-D_C Location: 355139-355499 bp Feature: domain Description: TraG-D_C Location: 3551 39-355499 bp Feature: domain Description: Ftsk_gamma Location: 355859-356039 bp Feature: domain Description: Ftsk_gamma Location: 355859-356039 bp Feature: domain Description: Ftsk_gamma Location: 356192-356366 bp Feature: domain Description: Ftsk_gamma Location: 3561 92-356366 bp Feature: gene Location: 356935-358725 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 357232-357928 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 357232-357928 bp Feature: domain Description: HNHc Note: nucleases Location: 358468-358600 bp Feature: domain Description: HNHc Note: nucleases Location: 358468-358600 bp Feature: gene Location: 359407-360711 bp Feature: gene Location: 360729-361118 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT rpsA (TIGR00717), TraG-D_C (pfam12696), Ftsk_gamma (smart00843), RVT-GII, HNHc (smart00507)

Seq: JH792027.1 Bacillus cereus VD014 genomic scaffold supercont1.3, whole genome shotgun sequence (324844 bp)
Overview 1 RT 1: 76860-80835 bp Neighborhood of RT #1 [76860, 80984] PinE PDDEXK_2 RVT_N RVT-GII GIIM HNHc Feature: gene Location: 76860-77429 bp Feature: domain Description: PinE Location: 76863-77415 bp Feature: domain Description: PinE Location: 76863-77415 bp Feature: gene Location: 78309-78581 bp Feature: domain Description: PDDEXK_2 Location: 78339-78570 bp Feature: domain Description: PDDEXK_2 Location: 78339-78570 bp Feature: gene Location: 78828-80984 bp Feature: RT Description: RVT_N Location: 79206-79449 bp Feature: RT Description: RVT_N Location: 792 06-79449 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 79506-80175 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 79506-80175 bp Feature: domain Description: GIIM Note: maturase Location: 80235-80469 bp Feature: domain Description: GIIM Note: maturase Location: 802 35-80469 bp Feature: domain Description: HNHc Note: nucleases Location: 80667-80835 bp Feature: domain Description: HNHc Note: nucleases Location: 80667-80835 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT PinE (COG1961), PDDEXK_2 (pfam12784), RVT_N (pfam13655), RVT-GII, GIIM (pfam08388), HNHc (smart00507)

Seq: JH792025.1 Bacillus cereus VD014 genomic scaffold supercont1.1, whole genome shotgun sequence (5255821 bp)
Overview 1 RT 1: 4529441-4534372 bp Neighborhood of RT #1 [4529441, 4534416] DUF2199 PDDEXK_2 RVT_N RVT-GII GIIM HNHc T_den_put_tspse DUF4262 Feature: gene Location: 4529441-4529950 bp Feature: domain Description: DUF2199 Location: 4529498-4529900 bp Feature: domain Description: DUF2199 Location: 4529498-4529900 bp Feature: gene Location: 4530181-4530453 bp Feature: domain Description: PDDEXK_2 Location: 4530211-4530442 bp Feature: domain Description: PDDEXK_2 Location: 453 0211-453 0442 bp Feature: gene Location: 4530700-4532856 bp Feature: RT Description: RVT_N Location: 4531078-4531321 bp Feature: RT Description: RVT_N Location: 453 1078-453 13 21 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 4531378-4532047 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 453 13 78-453 2047 bp Feature: domain Description: GIIM Note: maturase Location: 4532107-4532341 bp Feature: domain Description: GIIM Note: maturase Location: 453 2107-453 23 41 bp Feature: domain Description: HNHc Note: nucleases Location: 4532539-4532707 bp Feature: domain Description: HNHc Note: nucleases Location: 453 253 9-453 2707 bp Feature: gene Location: 4532831-4533616 bp Feature: domain Description: T_den_put_tspse Location: 4532939-4533602 bp Feature: domain Description: T_den_put_tspse Location: 453 293 9-453 3 602 bp Feature: gene Location: 4533658-4534416 bp Feature: domain Description: DUF4262 Location: 4534045-4534372 bp Feature: domain Description: DUF4262 Location: 453 4045-453 43 72 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT DUF2199 (pfam09965), PDDEXK_2 (pfam12784), RVT_N (pfam13655), RVT-GII, GIIM (pfam08388), HNHc (smart00507), T_den_put_tspse (TIGR01784), DUF4262 (pfam14081)