myRT

myRT report for GCA_000293175.1_CspCM59v1.0

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Seq: ALNN01000005.1 Capnocytophaga sp. CM59 ctg120006916608, whole genome shotgun sequence (152278 bp)
Overview 1 RT 1: 71775-78460 bp Neighborhood of RT #1 [71775, 78630] REC RVT-Retrons WYL Sfp Feature: gene Location: 71775-73889 bp Ori: EJU34046.1 Feature: domain Description: REC Location: 73044-73281 bp Feature: domain Description: REC Location: 73044-73281 bp Feature: gene Location: 73886-75226 bp Feature: gene Location: 75236-76609 bp Ori: EJU33945.1 Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 75440-76040 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 75440-76040 bp Feature: gene Location: 76965-77960 bp Ori: EJU34029.1 Feature: domain Description: WYL Location: 77427-77937 bp Feature: domain Description: WYL Location: 77427-77937 bp Feature: gene Location: 78010-78630 bp Ori: EJU33963.1 Feature: domain Description: Sfp Location: 78106-78460 bp Feature: domain Description: Sfp Location: 781 06-78460 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT REC (smart00448), RVT-Retrons, WYL (pfam13280), Sfp (COG2091)

Seq: ALNN01000034.1 Capnocytophaga sp. CM59 ctg120006916593, whole genome shotgun sequence (75661 bp)
Overview 1 RT 1: 31384-37021 bp Neighborhood of RT #1 [31384, 37032] carB RVT-UG2 COG4637 Feature: gene Location: 31384-31644 bp Feature: gene Location: 31807-34659 bp Ori: EJU29622.1 Gene: carB Feature: domain Description: carB Location: 31810-34621 bp Feature: domain Description: carB Location: 31810-3462 1 bp Feature: gene Location: 35148-36701 bp Ori: EJU29669.1 Feature: RT Description: RVT-UG2 Note: UG2 RT Location: 35394-36336 bp Feature: RT Description: RVT-UG2 Note: UG2 RT Location: 35394-36336 bp Feature: gene Location: 36665-36784 bp Feature: gene Location: 36799-37032 bp Ori: EJU29651.1 Feature: domain Description: COG4637 Location: 36811-37021 bp Feature: domain Description: COG4637 Location: 36811-3702 1 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT carB (PRK12815), RVT-UG2, COG4637 (Predicted ATPase )