myRT

myRT report for GCA_000293545.1_Baci_cere_BAG60-2_G13207_V1

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Seq: JH804629.1 Bacillus cereus BAG6O-2 genomic scaffold supercont1.2, whole genome shotgun sequence (1343920 bp)
Overview 1 RT 1: 762898-769382 bp 2 RT 2: 1250097-1256697 bp 3 RT 3: 1333487-1339030 bp Neighborhood of RT #1 [762898, 769420] TPR TPR_7 TPR TPR TPR_2 AroA RVT-GII HNHc PRK14806 PRK03158 Neighborhood of RT #2 [1250097, 1256697] COG4585 ETR_like RVT-GII HNHc PRK12856 Neighborhood of RT #3 [1333487, 1339212] DUF4176 RVT-GII GIIM DDE_Tnp_1 YdiL Feature: gene Location: 762898-764160 bp Ori: EJV60128.1 Feature: domain Description: TPR Location: 762913-763168 bp Feature: domain Description: TPR Location: 76291 3-7631 68 bp Feature: domain Description: TPR_7 Location: 763318-763387 bp Feature: domain Description: TPR_7 Location: 76331 8-763387 bp Feature: domain Description: TPR Location: 763420-763690 bp Feature: domain Description: TPR Location: 763420-763690 bp Feature: domain Description: TPR Location: 763720-763996 bp Feature: domain Description: TPR Location: 763720-763996 bp Feature: domain Description: TPR_2 Location: 764023-764113 bp Feature: domain Description: TPR_2 Location: 764023-7641 1 3 bp Feature: gene Location: 764268-765041 bp Ori: EJV60129.1 Feature: domain Description: AroA Location: 764328-765036 bp Feature: domain Description: AroA Location: 764328-765036 bp Feature: gene Location: 765063-766832 bp Ori: EJV60130.1 Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 765321-766017 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 765321 -76601 7 bp Feature: domain Description: HNHc Note: nucleases Location: 766578-766716 bp Feature: domain Description: HNHc Note: nucleases Location: 766578-76671 6 bp Feature: gene Location: 767521-768150 bp Ori: EJV60131.1 Feature: domain Description: PRK14806 Location: 767539-768106 bp Feature: domain Description: PRK1 4806 Location: 767539-7681 06 bp Feature: gene Location: 768308-769420 bp Ori: EJV60132.1 Feature: domain Description: PRK03158 Location: 768314-769382 bp Feature: domain Description: PRK031 58 Location: 76831 4-769382 bp Feature: gene Location: 1250097-1251314 bp Ori: EJV59137.1 Feature: domain Description: COG4585 Location: 1250163-1251285 bp Feature: domain Description: COG4585 Location: 1 2501 63-1 251 285 bp Feature: gene Location: 1252071-1253078 bp Ori: EJV59138.1 Feature: domain Description: ETR_like Location: 1252092-1253028 bp Feature: domain Description: ETR_like Location: 1 252092-1 253028 bp Feature: gene Location: 1253767-1255536 bp Ori: EJV59139.1 Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1254025-1254721 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1 254025-1 254721 bp Feature: domain Description: HNHc Note: nucleases Location: 1255282-1255420 bp Feature: domain Description: HNHc Note: nucleases Location: 1 255282-1 255420 bp Feature: gene Location: 1255723-1256034 bp Ori: EJV59140.1 Feature: domain Description: PRK12856 Location: 1255726-1256032 bp Feature: domain Description: PRK1 2856 Location: 1 255726-1 256032 bp Feature: gene Location: 1256236-1256697 bp Feature: gene Location: 1333487-1333888 bp Feature: gene Location: 1334006-1334269 bp Ori: EJV58801.1 Feature: domain Description: DUF4176 Location: 1334033-1334249 bp Feature: domain Description: DUF41 76 Location: 1 334033-1 334249 bp Feature: gene Location: 1335323-1336630 bp Ori: EJV58802.1 Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1335608-1336247 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1 335608-1 336247 bp Feature: domain Description: GIIM Note: maturase Location: 1336322-1336547 bp Feature: domain Description: GIIM Note: maturase Location: 1 336322-1 336547 bp Feature: gene Location: 1337135-1338193 bp Ori: EJV58803.1 Feature: domain Description: DDE_Tnp_1 Location: 1337495-1338179 bp Feature: domain Description: DDE_Tnp_1 Location: 1 337495-1 3381 79 bp Feature: gene Location: 1338322-1339212 bp Ori: EJV58804.1 Feature: domain Description: YdiL Location: 1338397-1339030 bp Feature: domain Description: YdiL Location: 1 338397-1 339030 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT TPR (smart00028), TPR_7 (pfam13176), TPR_2 (pfam07719), AroA (COG0128), RVT-GII, HNHc (smart00507), PRK14806 (bifunctional cyclohexadienyl dehydrogenase/ 3-phosphoshikimate 1-carboxyvinyltransferase; Provisional), PRK03158 (histidinol-phosphate aminotransferase; Provisional), COG4585 (Signal transduction histidine kinase ), ETR_like (cd05282)
PRK12856 (hypothetical protein; Provisional), DUF4176 (pfam13780), GIIM (pfam08388), DDE_Tnp_1 (pfam01609), YdiL (COG1266)

Seq: JH804632.1 Bacillus cereus BAG6O-2 genomic scaffold supercont1.5, whole genome shotgun sequence (221454 bp)
Overview 1 RT 1: 31373-38619 bp 2 RT 2: 73422-78882 bp 3 RT 3: 181224-188848 bp Neighborhood of RT #1 [31373, 38672] Vgb YvrE Vgb LbH_XAT RVT-GII HNHc DUF1282 Neighborhood of RT #2 [73422, 78917] CPBP DDE_Tnp_1 RVT-GII GIIM CPBP Neighborhood of RT #3 [181224, 188850] GerA DDE_Tnp_1 RVT-GII GIIM photo_TT_lyase Feature: gene Location: 31373-32260 bp Ori: EJV55994.1 Feature: domain Description: Vgb Location: 31385-31622 bp Feature: domain Description: Vgb Location: 31385-3162 2 bp Feature: domain Description: YvrE Location: 31643-31904 bp Feature: domain Description: YvrE Location: 31643-31904 bp Feature: domain Description: Vgb Location: 31931-32174 bp Feature: domain Description: Vgb Location: 31931-32 174 bp Feature: gene Location: 32286-32939 bp Ori: EJV55995.1 Feature: domain Description: LbH_XAT Location: 32391-32859 bp Feature: domain Description: LbH_XAT Location: 32 391-32 859 bp Feature: gene Location: 33858-35675 bp Ori: EJV55996.1 Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 34158-34857 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 34158-34857 bp Feature: domain Description: HNHc Note: nucleases Location: 35430-35565 bp Feature: domain Description: HNHc Note: nucleases Location: 35430-35565 bp Feature: gene Location: 36183-37061 bp Feature: gene Location: 37977-38672 bp Ori: EJV55911.1 Feature: domain Description: DUF1282 Location: 38034-38619 bp Feature: domain Description: DUF12 82 Location: 38034-38619 bp Feature: gene Location: 73422-73907 bp Ori: EJV55945.1 Feature: domain Description: CPBP Location: 73578-73878 bp Feature: domain Description: CPBP Location: 73578-73878 bp Feature: gene Location: 74244-75302 bp Ori: EJV55946.1 Feature: domain Description: DDE_Tnp_1 Location: 74604-75288 bp Feature: domain Description: DDE_Tnp_1 Location: 74604-752 88 bp Feature: gene Location: 75697-76632 bp Ori: EJV55947.1 Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 75982-76621 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 75982 -7662 1 bp Feature: gene Location: 76616-76996 bp Ori: EJV55948.1 Feature: domain Description: GIIM Note: maturase Location: 76691-76916 bp Feature: domain Description: GIIM Note: maturase Location: 76691-76916 bp Feature: gene Location: 78432-78917 bp Ori: EJV55949.1 Feature: domain Description: CPBP Location: 78585-78882 bp Feature: domain Description: CPBP Location: 78585-78882 bp Feature: gene Location: 181224-182771 bp Ori: EJV55643.1 Feature: domain Description: GerA Location: 181359-182718 bp Feature: domain Description: GerA Location: 181359-182 718 bp Feature: gene Location: 182997-184055 bp Ori: EJV55644.1 Feature: domain Description: DDE_Tnp_1 Location: 183354-184041 bp Feature: domain Description: DDE_Tnp_1 Location: 183354-184041 bp Feature: gene Location: 184560-185867 bp Ori: EJV55645.1 Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 184845-185484 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 184845-185484 bp Feature: domain Description: GIIM Note: maturase Location: 185559-185784 bp Feature: domain Description: GIIM Note: maturase Location: 185559-185784 bp Feature: gene Location: 186764-187057 bp Feature: gene Location: 187825-188850 bp Ori: EJV55647.1 Feature: domain Description: photo_TT_lyase Location: 187837-188848 bp Feature: domain Description: photo_TT_lyase Location: 187837-188848 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT Vgb (COG4257), YvrE (COG3386), LbH_XAT (cd03349), RVT-GII, HNHc (smart00507), DUF1282 (pfam06930), CPBP, DDE_Tnp_1 (pfam01609), GIIM (pfam08388), GerA (pfam03323)
photo_TT_lyase (TIGR04070)

Seq: JH804631.1 Bacillus cereus BAG6O-2 genomic scaffold supercont1.4, whole genome shotgun sequence (406575 bp)
Overview 1 RT 1: 144695-151205 bp 2 RT 2: 176062-181968 bp 3 RT 3: 289297-297257 bp 4 RT 4: 314494-318747 bp Neighborhood of RT #1 [144695, 151205] DDE_Tnp_1 RVT-GII GIIM DDE_Tnp_1 Neighborhood of RT #2 [176062, 181968] INTN1_C_like RVT-GII DDE_Tnp_1 Neighborhood of RT #3 [289297, 297271] Replic_Relax Replic_Relax Lysozyme_like RVT-GII HNHc CwlT_like RVT-GII Intron_maturas2 HNHc YutE Y1_Tnp Neighborhood of RT #4 [314494, 318747] RadC RVT-GII Phage_int_SAM_4 Feature: gene Location: 144695-146125 bp Ori: EJV56791.1 Feature: domain Description: DDE_Tnp_1 Location: 145055-145850 bp Feature: domain Description: DDE_Tnp_1 Location: 145055-145850 bp Feature: gene Location: 146415-146893 bp Feature: gene Location: 147903-149210 bp Ori: EJV56770.1 Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 148188-148827 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 148188-148827 bp Feature: domain Description: GIIM Note: maturase Location: 148902-149127 bp Feature: domain Description: GIIM Note: maturase Location: 148902-149127 bp Feature: gene Location: 149715-150773 bp Ori: EJV56771.1 Feature: domain Description: DDE_Tnp_1 Location: 150075-150759 bp Feature: domain Description: DDE_Tnp_1 Location: 150075-150759 bp Feature: gene Location: 150906-151205 bp Feature: gene Location: 176062-177948 bp Ori: EJV56757.1 Feature: domain Description: INTN1_C_like Location: 176974-177529 bp Feature: domain Description: INTN1_C_like Location: 176974-177529 bp Feature: gene Location: 177948-178343 bp Feature: gene Location: 179309-180088 bp Ori: EJV56680.1 Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 179594-180083 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 179594-180083 bp Feature: gene Location: 180593-181309 bp Ori: EJV56681.1 Feature: domain Description: DDE_Tnp_1 Location: 180608-181295 bp Feature: domain Description: DDE_Tnp_1 Location: 180608-181295 bp Feature: gene Location: 181861-181968 bp Feature: gene Location: 289297-289872 bp Ori: EJV56359.1 Feature: domain Description: Replic_Relax Location: 289300-289429 bp Feature: domain Description: Replic_Relax Location: 2893 00-289429 bp Feature: domain Description: Replic_Relax Location: 289474-289726 bp Feature: domain Description: Replic_Relax Location: 289474-289726 bp Feature: gene Location: 290268-290588 bp Ori: EJV56360.1 Feature: domain Description: Lysozyme_like Location: 290403-290565 bp Feature: domain Description: Lysozyme_like Location: 290403 -290565 bp Feature: gene Location: 291277-293046 bp Ori: EJV56361.1 Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 291535-292231 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 29153 5-29223 1 bp Feature: domain Description: HNHc Note: nucleases Location: 292792-292930 bp Feature: domain Description: HNHc Note: nucleases Location: 292792-29293 0 bp Feature: gene Location: 293185-293457 bp Ori: EJV56362.1 Feature: domain Description: CwlT_like Location: 293191-293449 bp Feature: domain Description: CwlT_like Location: 293 191-293 449 bp Feature: gene Location: 294034-295857 bp Ori: EJV56363.1 Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 294298-295132 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 294298-29513 2 bp Feature: domain Description: Intron_maturas2 Location: 295204-295549 bp Feature: domain Description: Intron_maturas2 Location: 295204-295549 bp Feature: domain Description: HNHc Note: nucleases Location: 295678-295834 bp Feature: domain Description: HNHc Note: nucleases Location: 295678-29583 4 bp Feature: gene Location: 296180-296593 bp Ori: EJV56364.1 Feature: domain Description: YutE Location: 296186-296582 bp Feature: domain Description: YutE Location: 296186-296582 bp Feature: gene Location: 296873-297271 bp Ori: EJV56365.1 Feature: domain Description: Y1_Tnp Location: 296909-297257 bp Feature: domain Description: Y1_Tnp Location: 296909-297257 bp Feature: gene Location: 314494-315303 bp Feature: gene Location: 315876-316190 bp Ori: EJV56389.1 Feature: domain Description: RadC Location: 315930-316185 bp Feature: domain Description: RadC Location: 3 1593 0-3 16185 bp Feature: gene Location: 316743-317210 bp Ori: EJV56390.1 Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 317007-317088 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 3 17007-3 17088 bp Feature: gene Location: 318141-318515 bp Ori: EJV56391.1 Feature: domain Description: Phage_int_SAM_4 Location: 318246-318417 bp Feature: domain Description: Phage_int_SAM_4 Location: 3 18246-3 18417 bp Feature: gene Location: 318478-318747 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT DDE_Tnp_1 (pfam01609), RVT-GII, GIIM (pfam08388), INTN1_C_like (cd01185), Replic_Relax (pfam13814), Lysozyme_like (pfam13702), HNHc (smart00507), CwlT_like, Intron_maturas2 (pfam01348), YutE (COG2445)
Y1_Tnp (pfam01797), RadC (pfam04002), Phage_int_SAM_4 (pfam13495)

Seq: JH804628.1 Bacillus cereus BAG6O-2 genomic scaffold supercont1.1, whole genome shotgun sequence (2919583 bp)
Overview 1 RT 1: 689350-695561 bp 2 RT 2: 885784-890860 bp Neighborhood of RT #1 [689350, 695561] AmpS BioC RVT-GII GIIM DDE_Tnp_1 Neighborhood of RT #2 [885784, 890910] RVT-GII MFS_ShiA_like Feature: gene Location: 689350-690462 bp Ori: EJV71158.1 Feature: domain Description: AmpS Location: 689362-690433 bp Feature: domain Description: AmpS Location: 689362-6904 33 bp Feature: gene Location: 690753-691496 bp Ori: EJV71159.1 Feature: domain Description: BioC Location: 690882-691182 bp Feature: domain Description: BioC Location: 690882-691182 bp Feature: gene Location: 692341-693648 bp Ori: EJV71160.1 Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 692626-693265 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 692626-693265 bp Feature: domain Description: GIIM Note: maturase Location: 693340-693565 bp Feature: domain Description: GIIM Note: maturase Location: 69334 0-693565 bp Feature: gene Location: 694153-695211 bp Ori: EJV71161.1 Feature: domain Description: DDE_Tnp_1 Location: 694510-695197 bp Feature: domain Description: DDE_Tnp_1 Location: 694 510-695197 bp Feature: gene Location: 695370-695561 bp Feature: gene Location: 885784-885930 bp Feature: gene Location: 887300-887826 bp Feature: gene Location: 887927-888706 bp Ori: EJV70094.1 Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 888212-888701 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 888212-888701 bp Feature: gene Location: 889189-889338 bp Feature: gene Location: 889603-890910 bp Ori: EJV70096.1 Feature: domain Description: MFS_ShiA_like Location: 889633-890860 bp Feature: domain Description: MFS_ShiA_like Location: 889633-890860 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT AmpS (COG2309), BioC (TIGR02072), RVT-GII, GIIM (pfam08388), DDE_Tnp_1 (pfam01609), MFS_ShiA_like (cd17369)