myRT

myRT report for GCA_000293685.1_Baci_cere_HD73_V1

Download annotations/find similar RTs

Seq: JH804661.1 Bacillus cereus HD73 genomic scaffold supercont1.12, whole genome shotgun sequence (40289 bp)
Overview 1 RT 1: 3473-9777 bp Neighborhood of RT #1 [3473, 9777] VirB4_CagE Lysozyme_like RVT-GII HNHc Lysozyme_like Spr Feature: gene Location: 3473-5407 bp Feature: domain Description: VirB4_CagE Location: 3803-5318 bp Feature: domain Description: VirB4_CagE Location: 3803-531 8 bp Feature: gene Location: 5409-5795 bp Feature: domain Description: Lysozyme_like Location: 5628-5775 bp Feature: domain Description: Lysozyme_like Location: 5628-5775 bp Feature: gene Location: 6469-8274 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 6763-7459 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 6763-7459 bp Feature: domain Description: HNHc Note: nucleases Location: 8020-8158 bp Feature: domain Description: HNHc Note: nucleases Location: 8020-81 58 bp Feature: gene Location: 8390-9145 bp Feature: domain Description: Lysozyme_like Location: 8393-8729 bp Feature: domain Description: Lysozyme_like Location: 8393-8729 bp Feature: domain Description: Spr Location: 8741-9131 bp Feature: domain Description: Spr Location: 8741 -91 31 bp Feature: gene Location: 9169-9777 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT VirB4_CagE (TIGR00929), Lysozyme_like (pfam13702), RVT-GII, HNHc (smart00507), Spr (COG0791)

Seq: JH804652.1 Bacillus cereus HD73 genomic scaffold supercont1.3, whole genome shotgun sequence (856784 bp)
Overview 1 RT 1: 346325-351090 bp Neighborhood of RT #1 [346325, 351092] YxeA Lysozyme_like RVT-GII Intron_maturas2 HNHc RimL Feature: gene Location: 346325-346693 bp Feature: domain Description: YxeA Location: 346376-346682 bp Feature: domain Description: YxeA Location: 346376-346682 bp Feature: gene Location: 347109-347690 bp Feature: domain Description: Lysozyme_like Location: 347244-347679 bp Feature: domain Description: Lysozyme_like Location: 3472 44-347679 bp Feature: gene Location: 348266-350089 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 348530-349364 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 348530-349364 bp Feature: domain Description: Intron_maturas2 Location: 349433-349772 bp Feature: domain Description: Intron_maturas2 Location: 349433-349772 bp Feature: domain Description: HNHc Note: nucleases Location: 349910-350066 bp Feature: domain Description: HNHc Note: nucleases Location: 349910-350066 bp Feature: gene Location: 350091-350222 bp Feature: gene Location: 350586-351092 bp Feature: domain Description: RimL Location: 350595-351090 bp Feature: domain Description: RimL Location: 350595-351090 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT YxeA (COG5294), Lysozyme_like (pfam13702), RVT-GII, Intron_maturas2 (pfam01348), HNHc (smart00507), RimL (COG1670)

Seq: JH804650.1 Bacillus cereus HD73 genomic scaffold supercont1.1, whole genome shotgun sequence (1841581 bp)
Overview 1 RT 1: 1181496-1187844 bp 2 RT 2: 1701907-1708116 bp Neighborhood of RT #1 [1181496, 1187909] CdnL FadH RVT-GII HNHc OYE_like_FMN GltS_FMN Neighborhood of RT #2 [1701907, 1708280] OmpR RVT-GII HNHc HATPase_BceS-YxdK-YvcQ-like Uup Uup Feature: gene Location: 1181496-1181972 bp Feature: domain Description: CdnL Location: 1181514-1181967 bp Feature: domain Description: CdnL Location: 1181514-1181967 bp Feature: gene Location: 1182534-1182788 bp Feature: domain Description: FadH Location: 1182621-1182753 bp Feature: domain Description: FadH Location: 1182621-1182753 bp Feature: gene Location: 1183451-1185256 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1183745-1184441 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1183 745-1184441 bp Feature: domain Description: HNHc Note: nucleases Location: 1185002-1185140 bp Feature: domain Description: HNHc Note: nucleases Location: 1185002-1185140 bp Feature: gene Location: 1185308-1186267 bp Feature: domain Description: OYE_like_FMN Location: 1185359-1186238 bp Feature: domain Description: OYE_like_FMN Location: 11853 59-118623 8 bp Feature: gene Location: 1186335-1187909 bp Feature: domain Description: GltS_FMN Location: 1186482-1187844 bp Feature: domain Description: GltS_FMN Location: 1186482-1187844 bp Feature: gene Location: 1701907-1702614 bp Feature: domain Description: OmpR Location: 1701916-1702585 bp Feature: domain Description: OmpR Location: 1701916-1702585 bp Feature: gene Location: 1702611-1702862 bp Feature: gene Location: 1703536-1705341 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1703830-1704526 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1703 83 0-1704526 bp Feature: domain Description: HNHc Note: nucleases Location: 1705087-1705225 bp Feature: domain Description: HNHc Note: nucleases Location: 1705087-1705225 bp Feature: gene Location: 1705592-1706200 bp Feature: domain Description: HATPase_BceS-YxdK-YvcQ-like Location: 1705865-1706189 bp Feature: domain Description: HATPase_BceS-YxdK-YvcQ-like Location: 1705865-1706189 bp Feature: gene Location: 1706652-1708280 bp Feature: domain Description: Uup Location: 1706661-1706892 bp Feature: domain Description: Uup Location: 1706661-1706892 bp Feature: domain Description: Uup Location: 1706907-1708116 bp Feature: domain Description: Uup Location: 1706907-1708116 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT CdnL (COG1329), FadH (COG1902), RVT-GII, HNHc (smart00507), OYE_like_FMN (cd02933), GltS_FMN (cd02808), OmpR (COG0745), HATPase_BceS-YxdK-YvcQ-like (cd16948), Uup (COG0488)

Seq: JH804660.1 Bacillus cereus HD73 genomic scaffold supercont1.11, whole genome shotgun sequence (65185 bp)
Overview 1 RT 1: 1174-5309 bp Neighborhood of RT #1 [1174, 5309] DDE_Tnp_1 RVT-GII GIIM Feature: gene Location: 1174-1392 bp Feature: gene Location: 1505-2557 bp Feature: domain Description: DDE_Tnp_1 Location: 1859-2543 bp Feature: domain Description: DDE_Tnp_1 Location: 1859-254 3 bp Feature: gene Location: 3062-4369 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 3347-3986 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 334 7-3986 bp Feature: domain Description: GIIM Note: maturase Location: 4061-4286 bp Feature: domain Description: GIIM Note: maturase Location: 4 061-4 286 bp Feature: gene Location: 5095-5211 bp Feature: gene Location: 5229-5309 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT DDE_Tnp_1 (pfam01609), RVT-GII, GIIM (pfam08388)

Seq: JH804654.1 Bacillus cereus HD73 genomic scaffold supercont1.5, whole genome shotgun sequence (356257 bp)
Overview 1 RT 1: 81343-85491 bp Neighborhood of RT #1 [81343, 85493] RVT-GII GIIM DDE_Tnp_1 NupC Feature: gene Location: 81343-82650 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 81628-82267 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 81628-82267 bp Feature: domain Description: GIIM Note: maturase Location: 82342-82567 bp Feature: domain Description: GIIM Note: maturase Location: 82342-825 67 bp Feature: gene Location: 83155-84213 bp Feature: domain Description: DDE_Tnp_1 Location: 83512-84199 bp Feature: domain Description: DDE_Tnp_1 Location: 835 12-84199 bp Feature: gene Location: 84315-85493 bp Feature: domain Description: NupC Location: 84318-85491 bp Feature: domain Description: NupC Location: 84318-85 491 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, GIIM (pfam08388), DDE_Tnp_1 (pfam01609), NupC (COG1972)

Seq: JH804651.1 Bacillus cereus HD73 genomic scaffold supercont1.2, whole genome shotgun sequence (1365417 bp)
Overview 1 RT 1: 1065317-1069861 bp Neighborhood of RT #1 [1065317, 1069861] RVT-GII GIIM DDE_Tnp_1 Feature: gene Location: 1065317-1065703 bp Feature: gene Location: 1066010-1066486 bp Feature: gene Location: 1066738-1068045 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1067023-1067662 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 106 7023-106 76 6 2 bp Feature: domain Description: GIIM Note: maturase Location: 1067737-1067962 bp Feature: domain Description: GIIM Note: maturase Location: 106 7737-106 796 2 bp Feature: gene Location: 1068550-1068906 bp Feature: domain Description: DDE_Tnp_1 Location: 1068706-1068892 bp Feature: domain Description: DDE_Tnp_1 Location: 106 8706 -106 8892 bp Feature: gene Location: 1069400-1069861 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, GIIM (pfam08388), DDE_Tnp_1 (pfam01609)