myRT

myRT report for GCA_000293785.1_ASM29378v1

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Seq: AKZI01000198.1 Rhodovulum sp. PH10 contig198, whole genome shotgun sequence (15611 bp)
Overview 1 RT 1: 7686-15097 bp Neighborhood of RT #1 [7686, 15097] CRISPR_Cas6 Cas2_I_II_III RVT-CRISPR Cas_Cas1 Feature: gene Location: 7686-8627 bp Ori: EJW09345.1 Feature: domain Description: CRISPR_Cas6 Location: 8253-8616 bp Feature: domain Description: CRISPR_Cas6 Location: 8253-861 6 bp Feature: gene Location: 9402-9689 bp Ori: EJW09346.1 Feature: domain Description: Cas2_I_II_III Location: 9426-9648 bp Feature: domain Description: Cas2_I_II_III Location: 9426-9648 bp Feature: gene Location: 9863-11965 bp Ori: EJW09347.1 Feature: RT Description: RVT-CRISPR Note: CRISPR RT Location: 10166-10751 bp Feature: RT Description: RVT-CRISPR Note: CRISPR RT Location: 1 01 66-1 0751 bp Feature: domain Description: Cas_Cas1 Location: 10934-11825 bp Feature: domain Description: Cas_Cas1 Location: 1 0934-1 1 825 bp Feature: gene Location: 12312-14303 bp Feature: gene Location: 14306-15097 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT CRISPR_Cas6 (pfam10040), Cas2_I_II_III (cl11442), RVT-CRISPR, Cas_Cas1 (pfam01867)

Seq: AKZI01000109.1 Rhodovulum sp. PH10 contig109, whole genome shotgun sequence (2504 bp)
Overview 1 RT 1: 432-1821 bp Neighborhood of RT #1 [432, 2189] RVT-GII Feature: gene Location: 432-950 bp Feature: gene Location: 909-2189 bp Ori: EJW10225.1 Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1134-1821 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1134-182 1 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII

Seq: AKZI01000170.1 Rhodovulum sp. PH10 contig170, whole genome shotgun sequence (7763 bp)
Overview 1 RT 1: 37-7031 bp Neighborhood of RT #1 [37, 7051] RAMP_I_III RVT-CRISPR Cas_Cas1 Cas2_I_II_III CRISPR_Cas6 Feature: gene Location: 37-1710 bp Ori: EJW09479.1 Feature: domain Description: RAMP_I_III Location: 76-481 bp Feature: domain Description: RAMP_I_III Location: 76-481 bp Feature: gene Location: 1778-3394 bp Feature: gene Location: 3805-5895 bp Ori: EJW09481.1 Feature: RT Description: RVT-CRISPR Note: CRISPR RT Location: 4150-4735 bp Feature: RT Description: RVT-CRISPR Note: CRISPR RT Location: 4150-473 5 bp Feature: domain Description: Cas_Cas1 Location: 4915-5755 bp Feature: domain Description: Cas_Cas1 Location: 4915-5755 bp Feature: gene Location: 5892-6185 bp Ori: EJW09482.1 Feature: domain Description: Cas2_I_II_III Location: 5922-6126 bp Feature: domain Description: Cas2_I_II_III Location: 5922-6126 bp Feature: gene Location: 6200-7051 bp Ori: EJW09483.1 Feature: domain Description: CRISPR_Cas6 Location: 6683-7031 bp Feature: domain Description: CRISPR_Cas6 Location: 6683 -703 1 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RAMP_I_III (cl21471), RVT-CRISPR, Cas_Cas1 (pfam01867), Cas2_I_II_III (cl11442), CRISPR_Cas6 (pfam10040)