myRT

myRT report for GCA_000294815.2_ASM29481v2

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Seq: JH806671.1 Enterococcus faecium V689 genomic scaffold Scfld68, whole genome shotgun sequence (2678 bp)
Overview 1 RT 1: 87-2295 bp Neighborhood of RT #1 [87, 2295] RVT-GII HNHc Feature: gene Location: 87-1946 bp Ori: EJX43896.1 Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 396-1137 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 396-1 1 37 bp Feature: domain Description: HNHc Note: nucleases Location: 1692-1830 bp Feature: domain Description: HNHc Note: nucleases Location: 1 692-1 830 bp Feature: gene Location: 2065-2295 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, HNHc (smart00507)

Seq: JH806794.1 Enterococcus faecium V689 genomic scaffold Scfld505, whole genome shotgun sequence (11323 bp)
Overview 1 RT 1: 4595-8899 bp Neighborhood of RT #1 [4595, 8899] PRK09290 AlbA_2 RVT-AbiP2 DUF3841 Feature: gene Location: 4595-5869 bp Ori: EJX39234.1 Feature: domain Description: PRK09290 Location: 4613-5861 bp Feature: domain Description: PRK092 90 Location: 4613-5861 bp Feature: gene Location: 5970-6284 bp Ori: EJX39235.1 Feature: domain Description: AlbA_2 Location: 6009-6180 bp Feature: domain Description: AlbA_2 Location: 6009-6180 bp Feature: gene Location: 6430-7926 bp Ori: EJX39236.1 Feature: RT Description: RVT-AbiP2 Note: AbiP2 RT Location: 6838-7294 bp Feature: RT Description: RVT-AbiP2 Note: AbiP2 RT Location: 6838-72 94 bp Feature: gene Location: 8104-8583 bp Ori: EJX39237.1 Feature: domain Description: DUF3841 Location: 8113-8488 bp Feature: domain Description: DUF3841 Location: 8113-8488 bp Feature: gene Location: 8750-8899 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT PRK09290 (allantoate amidohydrolase; Reviewed), AlbA_2 (pfam04326), RVT-AbiP2, DUF3841 (pfam12952)

Seq: JH806719.1 Enterococcus faecium V689 genomic scaffold Scfld212, whole genome shotgun sequence (2646 bp)
Overview 1 RT 1: 745-1744 bp Neighborhood of RT #1 [745, 2571] RVT-GII Feature: gene Location: 745-2571 bp Ori: EJX42139.1 Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1045-1744 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1045-1744 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII

Seq: JH806845.1 Enterococcus faecium V689 genomic scaffold Scfld955, whole genome shotgun sequence (86753 bp)
Overview 1 RT 1: 67061-72314 bp Neighborhood of RT #1 [67061, 72322] CE4_DAC_u3_5s RVT-GII GIIM AcrR CcmA Feature: gene Location: 67061-67180 bp Feature: gene Location: 67295-68620 bp Ori: EJX36988.1 Feature: domain Description: CE4_DAC_u3_5s Location: 67988-68381 bp Feature: domain Description: CE4 _DAC_u3_5s Location: 67988-68381 bp Feature: gene Location: 68713-70101 bp Ori: EJX36989.1 Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 69034-69649 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 69034 -6964 9 bp Feature: domain Description: GIIM Note: maturase Location: 69706-69922 bp Feature: domain Description: GIIM Note: maturase Location: 69706-69922 bp Feature: gene Location: 70588-71187 bp Ori: EJX36990.1 Feature: domain Description: AcrR Location: 70606-71092 bp Feature: domain Description: AcrR Location: 70606-71092 bp Feature: gene Location: 71441-72322 bp Ori: EJX36991.1 Feature: domain Description: CcmA Location: 71444-72314 bp Feature: domain Description: CcmA Location: 714 4 4 -72314 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT CE4_DAC_u3_5s (cd10972), RVT-GII, GIIM (pfam08388), AcrR (COG1309), CcmA (COG4133)

Seq: JH806661.1 Enterococcus faecium V689 genomic scaffold Scfld54, whole genome shotgun sequence (2761 bp)
Overview 1 RT 1: 131-1922 bp Neighborhood of RT #1 [131, 2041] RVT-GII HNHc Feature: gene Location: 131-2041 bp Ori: EJX44285.1 Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 464-1202 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 464-1202 bp Feature: domain Description: HNHc Note: nucleases Location: 1757-1922 bp Feature: domain Description: HNHc Note: nucleases Location: 175 7-1922 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, HNHc (smart00507)