myRT

myRT report for GCA_000294935.2_ASM29493v2

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Seq: JH807837.1 Enterococcus faecium R494 genomic scaffold Scfld75, whole genome shotgun sequence (2644 bp)
Overview 1 RT 1: 745-1744 bp Neighborhood of RT #1 [745, 2571] RVT-GII Feature: gene Location: 745-2571 bp Ori: EJX59120.1 Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1045-1744 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1 045-1 744 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII

Seq: JH807979.1 Enterococcus faecium R494 genomic scaffold Scfld845, whole genome shotgun sequence (3283 bp)
Overview 1 RT 1: 1-2621 bp Neighborhood of RT #1 [1, 3283] HsdM RVT-AbiP2 Feature: gene Location: 1-1476 bp Ori: EJX54017.1 Feature: domain Description: HsdM Location: 22-1447 bp Feature: domain Description: HsdM Location: 2 2 -1447 bp Feature: gene Location: 1814-3283 bp Ori: EJX54018.1 Feature: RT Description: RVT-AbiP2 Note: AbiP2 RT Location: 2156-2621 bp Feature: RT Description: RVT-AbiP2 Note: AbiP2 RT Location: 2 156-2 62 1 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT HsdM (COG0286), RVT-AbiP2

Seq: JH807963.1 Enterococcus faecium R494 genomic scaffold Scfld606, whole genome shotgun sequence (86268 bp)
Overview 1 RT 1: 66926-72179 bp Neighborhood of RT #1 [66926, 72187] CE4_DAC_u3_5s RVT-GII GIIM AcrR CcmA Feature: gene Location: 66926-67045 bp Feature: gene Location: 67160-68485 bp Ori: EJX54494.1 Feature: domain Description: CE4_DAC_u3_5s Location: 67853-68246 bp Feature: domain Description: CE4_DAC_u3 _5s Location: 67853 -68246 bp Feature: gene Location: 68578-69966 bp Ori: EJX54495.1 Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 68899-69514 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 68899-69514 bp Feature: domain Description: GIIM Note: maturase Location: 69571-69787 bp Feature: domain Description: GIIM Note: maturase Location: 69571-69787 bp Feature: gene Location: 70453-71052 bp Ori: EJX54496.1 Feature: domain Description: AcrR Location: 70471-70957 bp Feature: domain Description: AcrR Location: 70471-70957 bp Feature: gene Location: 71306-72187 bp Ori: EJX54497.1 Feature: domain Description: CcmA Location: 71309-72179 bp Feature: domain Description: CcmA Location: 713 09-72179 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT CE4_DAC_u3_5s (cd10972), RVT-GII, GIIM (pfam08388), AcrR (COG1309), CcmA (COG4133)

Seq: JH807842.1 Enterococcus faecium R494 genomic scaffold Scfld88, whole genome shotgun sequence (2761 bp)
Overview 1 RT 1: 131-2699 bp Neighborhood of RT #1 [131, 2699] RVT-GII HNHc Feature: gene Location: 131-2041 bp Ori: EJX58891.1 Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 464-1202 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 4 64 -1202 bp Feature: domain Description: HNHc Note: nucleases Location: 1757-1922 bp Feature: domain Description: HNHc Note: nucleases Location: 1757-1922 bp Feature: gene Location: 2550-2699 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, HNHc (smart00507)

Seq: JH807871.1 Enterococcus faecium R494 genomic scaffold Scfld154, whole genome shotgun sequence (2676 bp)
Overview 1 RT 1: 85-2293 bp Neighborhood of RT #1 [85, 2293] RVT-GII HNHc Feature: gene Location: 85-1944 bp Ori: EJX58012.1 Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 394-1135 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 394-1135 bp Feature: domain Description: HNHc Note: nucleases Location: 1690-1828 bp Feature: domain Description: HNHc Note: nucleases Location: 1690-1828 bp Feature: gene Location: 2063-2293 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, HNHc (smart00507)

Seq: JH807835.1 Enterococcus faecium R494 genomic scaffold Scfld73, whole genome shotgun sequence (11320 bp)
Overview 1 RT 1: 4594-8898 bp Neighborhood of RT #1 [4594, 8898] PRK09290 AlbA_2 RVT-AbiP2 DUF3841 Feature: gene Location: 4594-5868 bp Ori: EJX59155.1 Feature: domain Description: PRK09290 Location: 4612-5860 bp Feature: domain Description: PRK09290 Location: 46 12-586 0 bp Feature: gene Location: 5969-6283 bp Ori: EJX59156.1 Feature: domain Description: AlbA_2 Location: 6008-6179 bp Feature: domain Description: AlbA_2 Location: 6 008-6 179 bp Feature: gene Location: 6429-7925 bp Ori: EJX59157.1 Feature: RT Description: RVT-AbiP2 Note: AbiP2 RT Location: 6837-7293 bp Feature: RT Description: RVT-AbiP2 Note: AbiP2 RT Location: 6 837-7293 bp Feature: gene Location: 8103-8582 bp Ori: EJX59158.1 Feature: domain Description: DUF3841 Location: 8112-8487 bp Feature: domain Description: DUF3841 Location: 8112-8487 bp Feature: gene Location: 8749-8898 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT PRK09290 (allantoate amidohydrolase; Reviewed), AlbA_2 (pfam04326), RVT-AbiP2, DUF3841 (pfam12952)