myRT

myRT report for GCA_000295015.1_ASM29501v1

Download annotations/find similar RTs

Seq: JH809120.1 Enterococcus faecium P1140 genomic scaffold Scfld612, whole genome shotgun sequence (23717 bp)
Overview 1 RT 1: 1-4676 bp Neighborhood of RT #1 [1, 4684] Dcm FtsK RVT-GII HNHc FtsK_SpoIIIE RelB_DinJ Feature: gene Location: 1-251 bp Ori: EJX68950.1 Feature: domain Description: Dcm Location: 4-250 bp Feature: domain Description: Dcm Location: 4-250 bp Feature: gene Location: 296-676 bp Ori: EJX68951.1 Feature: domain Description: FtsK Location: 311-551 bp Feature: domain Description: FtsK Location: 31 1 -551 bp Feature: gene Location: 778-2652 bp Ori: EJX68952.1 Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1144-1840 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1 1 44-1 840 bp Feature: domain Description: HNHc Note: nucleases Location: 2380-2539 bp Feature: domain Description: HNHc Note: nucleases Location: 2380-2539 bp Feature: gene Location: 3246-4262 bp Ori: EJX68953.1 Feature: domain Description: FtsK_SpoIIIE Location: 3903-4143 bp Feature: domain Description: FtsK_SpoIIIE Location: 3903-41 43 bp Feature: gene Location: 4331-4684 bp Ori: EJX68954.1 Feature: domain Description: RelB_DinJ Location: 4550-4676 bp Feature: domain Description: RelB_DinJ Location: 4550-4676 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT Dcm (COG0270), FtsK (COG1674), RVT-GII, HNHc (smart00507), FtsK_SpoIIIE (pfam01580), RelB_DinJ (TIGR02384)

Seq: JH809100.1 Enterococcus faecium P1140 genomic scaffold Scfld424, whole genome shotgun sequence (8695 bp)
Overview 1 RT 1: 3620-8665 bp Neighborhood of RT #1 [3620, 8679] AAA_10 RVT-GII AAA_10 Feature: gene Location: 3620-4629 bp Feature: gene Location: 4650-5204 bp Ori: EJX69939.1 Feature: domain Description: AAA_10 Location: 4983-5166 bp Feature: domain Description: AAA_10 Location: 4983-5166 bp Feature: gene Location: 5901-7727 bp Ori: EJX69940.1 Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 6201-6900 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 62 01-6900 bp Feature: gene Location: 7861-8679 bp Ori: EJX69941.1 Feature: domain Description: AAA_10 Location: 7864-8665 bp Feature: domain Description: AAA_10 Location: 7864-8665 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT AAA_10 (pfam12846), RVT-GII

Seq: JH809057.1 Enterococcus faecium P1140 genomic scaffold Scfld217, whole genome shotgun sequence (3283 bp)
Overview 1 RT 1: 1-2621 bp Neighborhood of RT #1 [1, 3283] HsdM RVT-AbiP2 Feature: gene Location: 1-1476 bp Ori: EJX71023.1 Feature: domain Description: HsdM Location: 22-1447 bp Feature: domain Description: HsdM Location: 22-1447 bp Feature: gene Location: 1814-3283 bp Ori: EJX71024.1 Feature: RT Description: RVT-AbiP2 Note: AbiP2 RT Location: 2156-2621 bp Feature: RT Description: RVT-AbiP2 Note: AbiP2 RT Location: 2156-2621 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT HsdM (COG0286), RVT-AbiP2