myRT

myRT report for GCA_000295375.2_ASM29537v2

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Seq: JH812141.1 Enterococcus faecium C497 genomic scaffold Scfld452, whole genome shotgun sequence (21681 bp)
Overview 1 RT 1: 12774-17190 bp Neighborhood of RT #1 [12774, 17190] HTH_Tnp_1 PHA02517 RVT-GII PolY_Pol_V_umuC Feature: gene Location: 12774-13037 bp Feature: domain Description: HTH_Tnp_1 Location: 12789-12993 bp Feature: domain Description: HTH_Tnp_1 Location: 1 2789-1 2993 bp Feature: gene Location: 13178-13909 bp Feature: domain Description: PHA02517 Location: 13181-13886 bp Feature: domain Description: PHA0251 7 Location: 1 31 81 -1 3886 bp Feature: gene Location: 13926-15470 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 13956-14655 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1 3956-1 4655 bp Feature: gene Location: 15642-16847 bp Feature: domain Description: PolY_Pol_V_umuC Location: 15648-16626 bp Feature: domain Description: PolY_Pol_V_umuC Location: 1 5648-1 6626 bp Feature: gene Location: 16840-17190 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT HTH_Tnp_1 (pfam01527), PHA02517 (putative transposase OrfB; Reviewed), RVT-GII, PolY_Pol_V_umuC (cd01700)

Seq: JH812130.1 Enterococcus faecium C497 genomic scaffold Scfld352, whole genome shotgun sequence (24444 bp)
Overview 1 RT 1: 7104-13366 bp Neighborhood of RT #1 [7104, 13509] ArdA RVT-GII HNHc HTH_XRE Rol_Rep_N Rep_trans FtsK Feature: gene Location: 7104-7601 bp Feature: domain Description: ArdA Location: 7122-7587 bp Feature: domain Description: ArdA Location: 712 2 -7587 bp Feature: gene Location: 7718-7885 bp Feature: gene Location: 8046-9956 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 8379-9117 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 8379-9117 bp Feature: domain Description: HNHc Note: nucleases Location: 9672-9837 bp Feature: domain Description: HNHc Note: nucleases Location: 9672 -9837 bp Feature: gene Location: 10740-11945 bp Feature: domain Description: HTH_XRE Location: 10785-10929 bp Feature: domain Description: HTH_XRE Location: 10785-1092 9 bp Feature: domain Description: Rol_Rep_N Location: 10956-11223 bp Feature: domain Description: Rol_Rep_N Location: 10956-112 2 3 bp Feature: domain Description: Rep_trans Location: 11247-11856 bp Feature: domain Description: Rep_trans Location: 112 47-11856 bp Feature: gene Location: 12124-13509 bp Feature: domain Description: FtsK Location: 12733-13366 bp Feature: domain Description: FtsK Location: 12 733-13366 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT HTH_XRE (smart00530), Rol_Rep_N (pfam18106), Rep_trans (pfam02486), FtsK (COG1674), ArdA (pfam07275), RVT-GII, HNHc (smart00507)