myRT

myRT report for GCA_000297115.1_ASM29711v1

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Seq: CAKP01000036.1 Caloramator australicus RC3 WGS project CAKP00000000 data, contig 138, whole genome shotgun sequence (52406 bp)
Overview 1 RT 1: 48238-52314 bp Neighborhood of RT #1 [48238, 52394] FGE-sulfatase Avd_like RVT-DGRs ThrE DDE_Tnp_1 Feature: gene Location: 48238-49356 bp Ori: CCJ32904.1 Feature: domain Description: FGE-sulfatase Location: 48496-48826 bp Feature: domain Description: FGE-sulfatase Location: 48496-48826 bp Feature: gene Location: 49428-49772 bp Ori: CCJ32905.1 Feature: domain Description: Avd_like Location: 49449-49761 bp Feature: domain Description: Avd_like Location: 49449-49761 bp Feature: gene Location: 50080-51141 bp Ori: CCJ32906.1 Feature: RT Description: RVT-DGRs Note: DGRs RT Location: 50290-50941 bp Feature: RT Description: RVT-DGRs Note: DGRs RT Location: 50290-50941 bp Feature: gene Location: 51155-51472 bp Ori: CCJ32907.1 Feature: domain Description: ThrE Location: 51218-51437 bp Feature: domain Description: ThrE Location: 51 21 8-51 437 bp Feature: gene Location: 51621-52394 bp Ori: CCJ32908.1 Feature: domain Description: DDE_Tnp_1 Location: 51669-52314 bp Feature: domain Description: DDE_Tnp_1 Location: 51 669-5231 4 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT FGE-sulfatase (pfam03781), Avd_like (cd16376), RVT-DGRs, ThrE (pfam06738), DDE_Tnp_1 (pfam01609)

Seq: CAKP01000060.1 Caloramator australicus RC3 WGS project CAKP00000000 data, contig 172, whole genome shotgun sequence (18858 bp)
Overview 1 RT 1: 8003-13520 bp Neighborhood of RT #1 [8003, 13621] CbpA TPR RVT-CRISPR ligD_pol Cas2_I_II_III Cas_Cas1 Feature: gene Location: 8003-8464 bp Feature: gene Location: 8497-9114 bp Ori: CCJ33119.1 Feature: domain Description: CbpA Location: 8500-8683 bp Feature: domain Description: CbpA Location: 8500-8683 bp Feature: domain Description: TPR Location: 8713-9022 bp Feature: domain Description: TPR Location: 8713-902 2 bp Feature: gene Location: 10243-12384 bp Ori: CCJ33120.1 Feature: RT Description: RVT-CRISPR Note: CRISPR RT Location: 10264-10798 bp Feature: RT Description: RVT-CRISPR Note: CRISPR RT Location: 102 64-10798 bp Feature: domain Description: ligD_pol Location: 11386-11602 bp Feature: domain Description: ligD_pol Location: 11386-11602 bp Feature: gene Location: 12381-12695 bp Ori: CCJ33121.1 Feature: domain Description: Cas2_I_II_III Location: 12396-12651 bp Feature: domain Description: Cas2 _I_II_III Location: 12 396-12 651 bp Feature: gene Location: 12692-13621 bp Ori: CCJ33122.1 Feature: domain Description: Cas_Cas1 Location: 12704-13520 bp Feature: domain Description: Cas_Cas1 Location: 12 704-1352 0 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT CbpA (COG2214), TPR (smart00028), RVT-CRISPR, ligD_pol (TIGR02778), Cas2_I_II_III (cl11442), Cas_Cas1 (pfam01867)