myRT

myRT report for GCA_000297175.1_ASM29717v1

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Seq: AKKR01000065.1 Yersinia enterocolitica subsp. enterocolitica WA-314 contig_3_21, whole genome shotgun sequence (80339 bp)
Overview 1 RT 1: 52928-58202 bp Neighborhood of RT #1 [52928, 58390] FocA PRK09692 RVT-UG17 SLATT_5 Ogr_Delta Feature: gene Location: 52928-53839 bp Ori: EKA27075.1 Feature: domain Description: FocA Location: 53018-53786 bp Feature: domain Description: FocA Location: 5301 8-53786 bp Feature: gene Location: 54249-55430 bp Ori: EKA27076.1 Feature: domain Description: PRK09692 Location: 54258-55407 bp Feature: domain Description: PRK09692 Location: 54258-55407 bp Feature: gene Location: 55427-56761 bp Ori: EKA27077.1 Feature: RT Description: RVT-UG17 Note: UG17 RT Location: 55655-56258 bp Feature: RT Description: RVT-UG1 7 Note: UG1 7 RT Location: 55655-56258 bp Feature: gene Location: 56739-57323 bp Ori: EKA27078.1 Feature: domain Description: SLATT_5 Location: 56754-57285 bp Feature: domain Description: SLATT_5 Location: 56754-57285 bp Feature: gene Location: 58043-58390 bp Ori: EKA27079.1 Feature: domain Description: Ogr_Delta Location: 58067-58202 bp Feature: domain Description: Ogr_Delta Location: 58067-58202 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT FocA (COG2116), PRK09692 (Integrase; provisional), RVT-UG17, SLATT_5 (pfam18160), Ogr_Delta (pfam04606)

Seq: AKKR01000073.1 Yersinia enterocolitica subsp. enterocolitica WA-314 contig_3_29, whole genome shotgun sequence (10526 bp)
Overview 1 RT 1: 1411-6352 bp Neighborhood of RT #1 [1411, 6438] AlpA PRK09692 RVT-Retrons PRK09678 Feature: gene Location: 1411-1614 bp Ori: EKA26778.1 Feature: domain Description: AlpA Location: 1420-1597 bp Feature: domain Description: AlpA Location: 142 0-1597 bp Feature: gene Location: 2345-3541 bp Ori: EKA26779.1 Feature: domain Description: PRK09692 Location: 2348-3521 bp Feature: domain Description: PRK09692 Location: 2 348-352 1 bp Feature: gene Location: 3871-5094 bp Ori: EKA26780.1 Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 4021-4639 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 402 1-4639 bp Feature: gene Location: 5112-5864 bp Feature: gene Location: 6193-6438 bp Ori: EKA26782.1 Feature: domain Description: PRK09678 Location: 6196-6352 bp Feature: domain Description: PRK09678 Location: 6196-6352 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT AlpA (COG3311), PRK09692 (Integrase; provisional), RVT-Retrons, PRK09678 (DNA-binding transcriptional regulator; Provisional)