myRT

myRT report for GCA_000297335.1_ASM29733v1

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Seq: AKZG01000020.1 Pseudomonas aeruginosa CI27 Contig0021, whole genome shotgun sequence (150046 bp)
Overview 1 RT 1: 65717-76022 bp Neighborhood of RT #1 [65717, 76024] COG3177 RVT_N RVT-GII GIIM HNH PBP2_BvgS_HisK_like PRK09776 PAS PRK10060 PRK05658 Feature: gene Location: 65717-66838 bp Feature: domain Description: COG3177 Location: 65735-66827 bp Feature: domain Description: COG31 77 Location: 65735-66827 bp Feature: gene Location: 67097-67258 bp Feature: gene Location: 67561-69246 bp Feature: RT Description: RVT_N Location: 67618-67858 bp Feature: RT Description: RVT_N Location: 6761 8-67858 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 67906-68542 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 67906-68542 bp Feature: domain Description: GIIM Note: maturase Location: 68596-68827 bp Feature: domain Description: GIIM Note: maturase Location: 68596-68827 bp Feature: domain Description: HNH Note: nucleases Location: 69079-69217 bp Feature: domain Description: HNH Note: nucleases Location: 69079-6921 7 bp Feature: gene Location: 70327-74064 bp Feature: domain Description: PBP2_BvgS_HisK_like Location: 70435-71092 bp Feature: domain Description: PBP2_BvgS_HisK_like Location: 70435-71 092 bp Feature: domain Description: PRK09776 Location: 71305-71776 bp Feature: domain Description: PRK09776 Location: 71 305-71 776 bp Feature: domain Description: PAS Location: 71821-72358 bp Feature: domain Description: PAS Location: 71 821 -72358 bp Feature: domain Description: PRK10060 Location: 72367-74014 bp Feature: domain Description: PRK1 0060 Location: 72367-7401 4 bp Feature: gene Location: 74171-76024 bp Feature: domain Description: PRK05658 Location: 74183-76022 bp Feature: domain Description: PRK05658 Location: 741 83-76022 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT COG3177 (Fic family protein ), RVT_N (pfam13655), RVT-GII, GIIM (pfam08388), HNH (pfam01844), PBP2_BvgS_HisK_like (cd01007), PRK09776 (putative diguanylate cyclase; Provisional), PAS (smart00091), PRK10060 (cyclic di-GMP phosphodiesterase), PRK05658 (RNA polymerase sigma factor RpoD; Validated)