myRT

myRT report for GCA_000297755.1_Bact_frag_HMW_616_V1

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Seq: JH815524.1 Bacteroides fragilis HMW 616 genomic scaffold supercont1.1, whole genome shotgun sequence (2653618 bp)
Overview 1 RT 1: 427541-434050 bp 2 RT 2: 1575252-1584235 bp Neighborhood of RT #1 [427541, 434058] RVT-Retrons rpsA RNase_Z Neighborhood of RT #2 [1575252, 1585398] COG2865 RVT-UG2 AbiEii N6_Mtase COG4646 HELICc Feature: gene Location: 427541-429760 bp Feature: gene Location: 429775-429927 bp Feature: gene Location: 429970-431085 bp Ori: EKA82665.1 Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 430285-430837 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 430285-430837 bp Feature: gene Location: 431227-433020 bp Ori: EKA82666.1 Feature: domain Description: rpsA Location: 431305-432913 bp Feature: domain Description: rpsA Location: 431 305-43291 3 bp Feature: gene Location: 433144-434058 bp Ori: EKA82667.1 Feature: domain Description: RNase_Z Location: 433159-434050 bp Feature: domain Description: RNase_Z Location: 4331 59-434050 bp Feature: gene Location: 1575252-1576589 bp Ori: EKA81599.1 Feature: domain Description: COG2865 Location: 1575261-1576572 bp Feature: domain Description: COG2865 Location: 1 575261 -1 576572 bp Feature: gene Location: 1576680-1576844 bp Feature: gene Location: 1577721-1579076 bp Ori: EKA81601.1 Feature: RT Description: RVT-UG2 Note: UG2 RT Location: 1577727-1578645 bp Feature: RT Description: RVT-UG2 Note: UG2 RT Location: 1 577727-1 578645 bp Feature: gene Location: 1579309-1579680 bp Ori: EKA81602.1 Feature: domain Description: AbiEii Location: 1579339-1579651 bp Feature: domain Description: AbiEii Location: 1 579339-1 579651 bp Feature: gene Location: 1579750-1585398 bp Ori: EKA81603.1 Feature: domain Description: N6_Mtase Location: 1580050-1580707 bp Feature: domain Description: N6_Mtase Location: 1 580050-1 580707 bp Feature: domain Description: COG4646 Location: 1581526-1583821 bp Feature: domain Description: COG4646 Location: 1 581 526-1 583821 bp Feature: domain Description: HELICc Location: 1583935-1584235 bp Feature: domain Description: HELICc Location: 1 583935-1 584235 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-Retrons, rpsA (TIGR00717), RNase_Z (TIGR02651), COG2865 (Predicted transcriptional regulator, contains HTH domain ), RVT-UG2, AbiEii (pfam08843), N6_Mtase (pfam02384), COG4646 (Adenine-specific DNA methylase, N12 class ), HELICc (smart00490)