myRT

myRT report for GCA_000298055.1_Aero_hydr_SSU_V1

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Seq: JH815591.1 Aeromonas dhakensis strain SSU genomic scaffold supercont1.1, whole genome shotgun sequence (4791870 bp)
Overview 1 RT 1: 152514-161016 bp 2 RT 2: 3572015-3577473 bp Neighborhood of RT #1 [152514, 161021] PRK10936 TMAO_torS TMAO_torS RVT-GII Intron_maturas2 HNHc PRK13034 Neighborhood of RT #2 [3572015, 3577473] PRK10100 PRK09010 RVT-GII Intron_maturas2 HNHc PBP2_HisK Feature: gene Location: 152514-153566 bp Feature: domain Description: PRK10936 Location: 152622-153543 bp Feature: domain Description: PRK1 0936 Location: 1 52622-1 53543 bp Feature: gene Location: 153637-156450 bp Feature: domain Description: TMAO_torS Location: 153655-156100 bp Feature: domain Description: TMAO_torS Location: 1 53655-1 561 00 bp Feature: domain Description: TMAO_torS Location: 156157-156361 bp Feature: domain Description: TMAO_torS Location: 1 561 57-1 56361 bp Feature: gene Location: 156669-158198 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 156675-157422 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1 56675-1 57422 bp Feature: domain Description: Intron_maturas2 Location: 157590-157806 bp Feature: domain Description: Intron_maturas2 Location: 1 57590-1 57806 bp Feature: domain Description: HNHc Note: nucleases Location: 157947-158127 bp Feature: domain Description: HNHc Note: nucleases Location: 1 57947-1 581 27 bp Feature: gene Location: 159153-159347 bp Feature: gene Location: 159768-161021 bp Feature: domain Description: PRK13034 Location: 159783-161016 bp Feature: domain Description: PRK1 3034 Location: 1 59783-1 61 01 6 bp Feature: gene Location: 3572015-3572653 bp Feature: domain Description: PRK10100 Location: 3572036-3572651 bp Feature: domain Description: PRK1 01 00 Location: 3572036-3572651 bp Feature: gene Location: 3573191-3573766 bp Feature: domain Description: PRK09010 Location: 3573194-3573764 bp Feature: domain Description: PRK0901 0 Location: 35731 94-3573764 bp Feature: gene Location: 3574742-3576271 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 3574748-3575495 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 3574748-3575495 bp Feature: domain Description: Intron_maturas2 Location: 3575663-3575879 bp Feature: domain Description: Intron_maturas2 Location: 3575663-3575879 bp Feature: domain Description: HNHc Note: nucleases Location: 3576020-3576200 bp Feature: domain Description: HNHc Note: nucleases Location: 3576020-3576200 bp Feature: gene Location: 3576509-3577267 bp Feature: domain Description: PBP2_HisK Location: 3576590-3577253 bp Feature: domain Description: PBP2_HisK Location: 3576590-3577253 bp Feature: gene Location: 3577351-3577473 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT PRK10936 (TMAO reductase system periplasmic protein TorT; Provisional), TMAO_torS (TIGR02956), RVT-GII, Intron_maturas2 (pfam01348), HNHc (smart00507), PRK13034 (serine hydroxymethyltransferase; Reviewed), PRK10100 (transcriptional regulator CsgD), PRK09010 (single-stranded DNA-binding protein; Provisional), PBP2_HisK (cd13704)