myRT

myRT report for GCA_000300875.1_ASM30087v1

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Seq: AMSG01000002.1 Galbibacter marinus strain ck-I2-15 contig2, whole genome shotgun sequence (394717 bp)
Overview 1 RT 1: 3081-5933 bp Neighborhood of RT #1 [3081, 5933] RVT-DGRs Feature: gene Location: 3081-3551 bp Feature: gene Location: 3558-3929 bp Feature: gene Location: 4036-5115 bp Ori: EKF56213.1 Feature: RT Description: RVT-DGRs Note: DGRs RT Location: 4348-4939 bp Feature: RT Description: RVT-DGRs Note: DGRs RT Location: 4348-4939 bp Feature: gene Location: 5087-5383 bp Feature: gene Location: 5448-5933 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-DGRs

Seq: AMSG01000058.1 Galbibacter marinus strain ck-I2-15 contig58, whole genome shotgun sequence (1851 bp)
Overview 1 RT 1: 270-1592 bp Neighborhood of RT #1 [270, 1759] RVT-GII GIIM Feature: gene Location: 270-452 bp Feature: gene Location: 497-1759 bp Ori: EKF53822.1 Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 692-1307 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 692 -1307 bp Feature: domain Description: GIIM Note: maturase Location: 1379-1592 bp Feature: domain Description: GIIM Note: maturase Location: 1379-1592 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, GIIM (pfam08388)

Seq: AMSG01000021.1 Galbibacter marinus strain ck-I2-15 contig21, whole genome shotgun sequence (52550 bp)
Overview 1 RT 1: 25029-33382 bp Neighborhood of RT #1 [25029, 33453] UDP_invert_4-6DH_SDR_e GT_WecA_like RVT-UG14 GT4_WbuB-like wecC Feature: gene Location: 25029-26216 bp Ori: EKF54438.1 Feature: domain Description: UDP_invert_4-6DH_SDR_e Location: 25122-26040 bp Feature: domain Description: UDP_invert_4-6DH_SDR_e Location: 25122-26040 bp Feature: gene Location: 27155-28318 bp Ori: EKF54439.1 Feature: domain Description: GT_WecA_like Location: 27278-28037 bp Feature: domain Description: GT_WecA_like Location: 27278-2803 7 bp Feature: gene Location: 28935-30479 bp Ori: EKF54440.1 Feature: RT Description: RVT-UG14 Note: UG14 RT Location: 29361-29850 bp Feature: RT Description: RVT-UG14 Note: UG14 RT Location: 293 61-29850 bp Feature: gene Location: 30682-31875 bp Ori: EKF54441.1 Feature: domain Description: GT4_WbuB-like Location: 30688-31789 bp Feature: domain Description: GT4_WbuB-like Location: 3 0688-3 1789 bp Feature: gene Location: 32212-33453 bp Ori: EKF54442.1 Feature: domain Description: wecC Location: 32227-33382 bp Feature: domain Description: wecC Location: 3 2227-3 3 3 82 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT UDP_invert_4-6DH_SDR_e (cd05237), GT_WecA_like (cd06853), RVT-UG14, GT4_WbuB-like (cd03794), wecC (PRK11064)