myRT

myRT report for GCA_000300895.1_ASM30089v1

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Seq: AMSV01000029.1 Serratia plymuthica A30 sply.contig.30, whole genome shotgun sequence (70896 bp)
Overview 1 RT 1: 9487-13722 bp Neighborhood of RT #1 [9487, 14252] PRK15287 PRK15288 RVT-UG4 RfaL Feature: gene Location: 9487-9981 bp Ori: EKF65640.1 Feature: domain Description: PRK15287 Location: 9532-9979 bp Feature: domain Description: PRK1 5287 Location: 9532-9979 bp Feature: gene Location: 9996-10523 bp Ori: EKF65641.1 Gene: mrfG Feature: domain Description: PRK15288 Location: 9999-10518 bp Feature: domain Description: PRK1 5288 Location: 9999-1 051 8 bp Feature: gene Location: 10516-11493 bp Ori: EKF65642.1 Feature: RT Description: RVT-UG4 Note: UG4 RT Location: 10855-11302 bp Feature: RT Description: RVT-UG4 Note: UG4 RT Location: 1 0855-1 1 302 bp Feature: gene Location: 11531-12322 bp Feature: gene Location: 12546-14252 bp Ori: EKF65644.1 Feature: domain Description: RfaL Location: 12573-13722 bp Feature: domain Description: RfaL Location: 1 2573-1 3722 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT PRK15287 (fimbrial minor subunit StfF), PRK15288 (putative minor fimbrial subunit StfG; Provisional), RVT-UG4, RfaL (COG3307)

Seq: AMSV01000069.1 Serratia plymuthica A30 sply.contig.70, whole genome shotgun sequence (32201 bp)
Overview 1 RT 1: 7671-13181 bp Neighborhood of RT #1 [7671, 13183] PRK15201 HTH_LUXR PglL_A Wzy_C Wzy_C_2 RVT-UG4 FimA PRK15287 Feature: gene Location: 7671-8252 bp Ori: EKF61893.1 Feature: domain Description: PRK15201 Location: 7683-7851 bp Feature: domain Description: PRK152 01 Location: 7683-7851 bp Feature: domain Description: HTH_LUXR Location: 8073-8238 bp Feature: domain Description: HTH_LUXR Location: 8073-82 38 bp Feature: gene Location: 8285-9874 bp Ori: EKF61894.1 Feature: domain Description: PglL_A Location: 8627-8693 bp Feature: domain Description: PglL_A Location: 862 7-8693 bp Feature: domain Description: Wzy_C Location: 8771-9212 bp Feature: domain Description: Wzy_C Location: 8771-92 12 bp Feature: domain Description: Wzy_C_2 Location: 9320-9863 bp Feature: domain Description: Wzy_C_2 Location: 932 0-9863 bp Feature: gene Location: 11498-11959 bp Ori: EKF61895.1 Feature: RT Description: RVT-UG4 Note: UG4 RT Location: 11519-11921 bp Feature: RT Description: RVT-UG4 Note: UG4 RT Location: 11519-1192 1 bp Feature: gene Location: 12147-12689 bp Ori: EKF61896.1 Gene: mrfH Feature: domain Description: FimA Location: 12198-12687 bp Feature: domain Description: FimA Location: 12 198-12 687 bp Feature: gene Location: 12698-13183 bp Ori: EKF61897.1 Feature: domain Description: PRK15287 Location: 12767-13181 bp Feature: domain Description: PRK152 87 Location: 12 767-13181 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT PRK15201 (fimbriae biosynthesis transcriptional regulator FimW), HTH_LUXR (smart00421), PglL_A (pfam15864), Wzy_C (pfam04932), Wzy_C_2 (pfam11846), RVT-UG4, FimA (pfam16970), PRK15287 (fimbrial minor subunit StfF)