myRT

myRT report for GCA_000300955.1_Kleb_pneu_WGLW5_V1

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Seq: JH930429.1 Klebsiella pneumoniae subsp. pneumoniae WGLW5 genomic scaffold supercont1.2, whole genome shotgun sequence (1275233 bp)
Overview 1 RT 1: 469708-478489 bp Neighborhood of RT #1 [469708, 478506] YqgA PRK09692 RVT-UG4 FimD FimC Feature: gene Location: 469708-470421 bp Ori: EKB83609.1 Feature: domain Description: YqgA Location: 469714-470416 bp Feature: domain Description: YqgA Location: 46971 4-47041 6 bp Feature: gene Location: 471402-472265 bp Ori: EKB83610.1 Feature: domain Description: PRK09692 Location: 471426-472263 bp Feature: domain Description: PRK09692 Location: 471 426-472263 bp Feature: gene Location: 473023-475104 bp Ori: EKB83611.1 Feature: RT Description: RVT-UG4 Note: UG4 RT Location: 473434-473878 bp Feature: RT Description: RVT-UG4 Note: UG4 RT Location: 473434-473878 bp Feature: gene Location: 475101-477695 bp Ori: EKB83612.1 Feature: domain Description: FimD Location: 475143-477684 bp Feature: domain Description: FimD Location: 4751 43-477684 bp Feature: gene Location: 477742-478506 bp Ori: EKB83613.1 Feature: domain Description: FimC Location: 477787-478489 bp Feature: domain Description: FimC Location: 477787-478489 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT YqgA (COG1811), PRK09692 (Integrase; provisional), RVT-UG4, FimD (COG3188), FimC (COG3121)

Seq: JH930430.1 Klebsiella pneumoniae subsp. pneumoniae WGLW5 genomic scaffold supercont1.3, whole genome shotgun sequence (521071 bp)
Overview 1 RT 1: 458362-467974 bp Neighborhood of RT #1 [458362, 468090] COG2958 AAA_15 AAA_15 RVT-Retrons COG0610 AAA_13 AAA_13 Feature: gene Location: 458362-459294 bp Ori: EKB82737.1 Feature: domain Description: COG2958 Location: 458380-459274 bp Feature: domain Description: COG2 958 Location: 458380-4592 74 bp Feature: gene Location: 459868-461985 bp Ori: EKB82738.1 Feature: domain Description: AAA_15 Location: 459871-460288 bp Feature: domain Description: AAA_15 Location: 459871-4602 88 bp Feature: domain Description: AAA_15 Location: 460426-460852 bp Feature: domain Description: AAA_15 Location: 46042 6-460852 bp Feature: gene Location: 462158-463258 bp Ori: EKB82739.1 Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 462299-462860 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 462 2 99-462 860 bp Feature: gene Location: 463800-466919 bp Ori: EKB82740.1 Feature: domain Description: COG0610 Location: 463884-466896 bp Feature: domain Description: COG0610 Location: 463884-466896 bp Feature: gene Location: 466912-468090 bp Ori: EKB82741.1 Feature: domain Description: AAA_13 Location: 467005-467179 bp Feature: domain Description: AAA_13 Location: 467005-467179 bp Feature: domain Description: AAA_13 Location: 467401-467974 bp Feature: domain Description: AAA_13 Location: 467401-467974 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT COG2958 (Uncharacterized protein ), AAA_15 (pfam13175), RVT-Retrons, COG0610 (Type I site-specific restriction-modification system, R (restriction) subunit and related helicases ), AAA_13 (pfam13166)