myRT

myRT report for GCA_000301115.1_Lact_cris_FB049-03_V1

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Seq: JH932289.1 Lactobacillus crispatus FB049-03 genomic scaffold supercont1.3, whole genome shotgun sequence (639689 bp)
Overview 1 RT 1: 82992-87953 bp 2 RT 2: 272579-275670 bp Neighborhood of RT #1 [82992, 87964] Acyl_transf_3 PRK01237 RVT-GII GIIM GlpF Neighborhood of RT #2 [272579, 275670] DUF3100 RVT-GII TIGR02452 SlpA Feature: gene Location: 82992-84110 bp Ori: EKB64045.1 Feature: domain Description: Acyl_transf_3 Location: 83040-84042 bp Feature: domain Description: Acyl_transf_3 Location: 83040-84042 bp Feature: gene Location: 84216-85034 bp Ori: EKB64046.1 Feature: domain Description: PRK01237 Location: 84222-85023 bp Feature: domain Description: PRK01 237 Location: 84222-85023 bp Feature: gene Location: 85631-86929 bp Ori: EKB64047.1 Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 85832-86450 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 85832-86450 bp Feature: domain Description: GIIM Note: maturase Location: 86507-86714 bp Feature: domain Description: GIIM Note: maturase Location: 86507-8671 4 bp Feature: gene Location: 87031-87153 bp Feature: gene Location: 87212-87964 bp Ori: EKB64049.1 Feature: domain Description: GlpF Location: 87221-87953 bp Feature: domain Description: GlpF Location: 87221 -87953 bp Feature: gene Location: 272579-273397 bp Ori: EKB63312.1 Feature: domain Description: DUF3100 Location: 272639-273341 bp Feature: domain Description: DUF31 00 Location: 272639-273341 bp Feature: gene Location: 273585-273881 bp Feature: gene Location: 274021-274533 bp Ori: EKB63314.1 Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 274030-274222 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 274030-274222 bp Feature: domain Description: TIGR02452 Location: 274360-274519 bp Feature: domain Description: TIGR02452 Location: 274360-27451 9 bp Feature: gene Location: 274618-275397 bp Ori: EKB63315.1 Feature: domain Description: SlpA Location: 275233-275389 bp Feature: domain Description: SlpA Location: 275233-275389 bp Feature: gene Location: 275578-275670 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT Acyl_transf_3 (pfam01757), PRK01237 (triphosphoribosyl-dephospho-CoA synthase; Validated), RVT-GII, GIIM (pfam08388), GlpF (COG0580), DUF3100 (pfam11299), TIGR02452 (TIGR02452 family protein), SlpA (COG1047)

Seq: JH932290.1 Lactobacillus crispatus FB049-03 genomic scaffold supercont1.4, whole genome shotgun sequence (544666 bp)
Overview 1 RT 1: 178332-181777 bp Neighborhood of RT #1 [178332, 181791] RVT-GII GIIM PemK_toxin Feature: gene Location: 178332-178547 bp Feature: gene Location: 178701-179117 bp Feature: gene Location: 179200-180498 bp Ori: EKB61531.1 Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 179401-180019 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 179401-180019 bp Feature: domain Description: GIIM Note: maturase Location: 180076-180283 bp Feature: domain Description: GIIM Note: maturase Location: 180076-1802 83 bp Feature: gene Location: 181155-181430 bp Feature: gene Location: 181417-181791 bp Ori: EKB61533.1 Feature: domain Description: PemK_toxin Location: 181441-181777 bp Feature: domain Description: PemK_toxin Location: 181441-181777 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, GIIM (pfam08388), PemK_toxin (pfam02452)

Seq: JH932287.1 Lactobacillus crispatus FB049-03 genomic scaffold supercont1.1, whole genome shotgun sequence (626616 bp)
Overview 1 RT 1: 34842-39123 bp Neighborhood of RT #1 [34842, 39641] PRK09311 ribH RVT-GII group_II_RT_mat DDE_5 Feature: gene Location: 34842-36020 bp Ori: EKB71246.1 Feature: domain Description: PRK09311 Location: 34851-36015 bp Feature: domain Description: PRK093 11 Location: 3 4851-3 6015 bp Feature: gene Location: 36035-36499 bp Ori: EKB71247.1 Feature: domain Description: ribH Location: 36038-36494 bp Feature: domain Description: ribH Location: 3 603 8-3 6494 bp Feature: gene Location: 36577-37074 bp Ori: EKB71248.1 Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 36580-36658 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 3 6580-3 6658 bp Feature: gene Location: 37200-37382 bp Ori: EKB71249.1 Feature: domain Description: group_II_RT_mat Note: maturase Location: 37233-37353 bp Feature: domain Description: group_II_RT_mat Note: maturase Location: 3 723 3 -3 73 53 bp Feature: gene Location: 38238-39641 bp Ori: EKB71250.1 Feature: domain Description: DDE_5 Location: 38460-39123 bp Feature: domain Description: DDE_5 Location: 3 8460-3 9123 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT PRK09311 (bifunctional 3,4-dihydroxy-2-butanone-4-phosphate synthase/GTP cyclohydrolase II), ribH (PRK00061), RVT-GII, group_II_RT_mat (TIGR04416), DDE_5 (pfam13546)