myRT

myRT report for GCA_000301755.1_ASM30175v1

Download annotations/find similar RTs

Seq: AMJG01000123.1 Acinetobacter lwoffii TG19636 A_lwoffii_TG19636_124, whole genome shotgun sequence (13887 bp)
Overview 1 RT 1: 1966-4963 bp Neighborhood of RT #1 [1966, 4963] DDE_Tnp_1_5 RVT-GII GIIM Feature: gene Location: 1966-2142 bp Feature: gene Location: 2809-3003 bp Feature: domain Description: DDE_Tnp_1_5 Location: 2815-2998 bp Feature: domain Description: DDE_Tnp_1 _5 Location: 281 5-2998 bp Feature: gene Location: 3098-4339 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 3296-3953 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 3296-3953 bp Feature: domain Description: GIIM Note: maturase Location: 4031-4262 bp Feature: domain Description: GIIM Note: maturase Location: 4031 -4262 bp Feature: gene Location: 4346-4510 bp Feature: gene Location: 4775-4963 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT DDE_Tnp_1_5 (pfam13737), RVT-GII, GIIM (pfam08388)

Seq: AMJG01000242.1 Acinetobacter lwoffii TG19636 A_lwoffii_TG19636_243, whole genome shotgun sequence (18053 bp)
Overview 1 RT 1: 13488-17770 bp Neighborhood of RT #1 [13488, 17770] DUF1998 DDE_Tnp_IS66_C RVT_N RVT-GII GIIM Feature: gene Location: 13488-15356 bp Feature: domain Description: DUF1998 Location: 14931-15240 bp Feature: domain Description: DUF1998 Location: 14931-152 40 bp Feature: gene Location: 15384-15587 bp Feature: domain Description: DDE_Tnp_IS66_C Location: 15456-15564 bp Feature: domain Description: DDE_Tnp_IS66_C Location: 15456-15564 bp Feature: gene Location: 15709-17385 bp Feature: RT Description: RVT_N Location: 15769-16012 bp Feature: RT Description: RVT_N Location: 15769-16012 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 16057-16693 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 16057-16693 bp Feature: domain Description: GIIM Note: maturase Location: 16747-16978 bp Feature: domain Description: GIIM Note: maturase Location: 16747-16978 bp Feature: gene Location: 17555-17770 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT DUF1998 (pfam09369), DDE_Tnp_IS66_C (pfam13817), RVT_N (pfam13655), RVT-GII, GIIM (pfam08388)