myRT

myRT report for GCA_000302965.1_ASM30296v1

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Seq: JH942313.1 Vibrio cholerae CP1037(10) genomic scaffold vcoCP1037.contig.78, whole genome shotgun sequence (301898 bp)
Overview 1 RT 1: 253495-260438 bp Neighborhood of RT #1 [253495, 260458] PRK06939 tdh RVT-Retrons AAA_15 AAA_15 Hypoth_Ymh Feature: gene Location: 253495-254688 bp Ori: EKG70402.1 Gene: kbl Feature: domain Description: PRK06939 Location: 253498-254686 bp Feature: domain Description: PRK06939 Location: 253498-254686 bp Feature: gene Location: 254691-255722 bp Ori: EKG70455.1 Feature: domain Description: tdh Location: 254700-255720 bp Feature: domain Description: tdh Location: 254700-255720 bp Feature: gene Location: 256117-257217 bp Ori: EKG70433.1 Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 256258-256816 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 256258-25681 6 bp Feature: gene Location: 257393-259510 bp Ori: EKG70482.1 Feature: domain Description: AAA_15 Location: 257396-257813 bp Feature: domain Description: AAA_1 5 Location: 257396-25781 3 bp Feature: domain Description: AAA_15 Location: 257948-258377 bp Feature: domain Description: AAA_1 5 Location: 257948-258377 bp Feature: gene Location: 259658-260458 bp Ori: EKG70445.1 Feature: domain Description: Hypoth_Ymh Location: 260078-260438 bp Feature: domain Description: Hypoth_Ymh Location: 260078-260438 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT PRK06939 (2-amino-3-ketobutyrate coenzyme A ligase; Provisional), tdh (TIGR00692), RVT-Retrons, AAA_15 (pfam13175), Hypoth_Ymh (pfam09509)

Seq: JH942325.1 Vibrio cholerae CP1037(10) genomic scaffold vcoCP1037.contig.91, whole genome shotgun sequence (344735 bp)
Overview 1 RT 1: 215976-221487 bp Neighborhood of RT #1 [215976, 221487] LysR PRK10621 RVT-Retrons COG3950 Feature: gene Location: 215976-216836 bp Ori: EKG66582.1 Feature: domain Description: LysR Location: 215982-216810 bp Feature: domain Description: LysR Location: 2 15982 -2 16810 bp Feature: gene Location: 217338-217550 bp Ori: EKG66584.1 Feature: domain Description: PRK10621 Location: 217347-217461 bp Feature: domain Description: PRK1062 1 Location: 2 17347-2 17461 bp Feature: gene Location: 218036-218983 bp Ori: EKG66583.1 Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 218150-218747 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 2 18150-2 18747 bp Feature: gene Location: 218984-220606 bp Ori: EKG66590.1 Feature: domain Description: COG3950 Location: 219170-220601 bp Feature: domain Description: COG3950 Location: 2 19170-2 2 0601 bp Feature: gene Location: 221341-221487 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT LysR (COG0583), PRK10621 (hypothetical protein; Provisional), RVT-Retrons, COG3950 (Predicted ATP-binding protein involved in virulence )